Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.84■□□□□ 0.45
NKX6-1P78426 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.84■□□□□ 0.45
NKX6-1P78426 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.84■□□□□ 0.45
NKX6-1P78426 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.84■□□□□ 0.45
NKX6-1P78426 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.84■□□□□ 0.45
NKX6-1P78426 UNC93B5-201ENST00000530315 699 ntBASIC17.84■□□□□ 0.45
NKX6-1P78426 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-1P78426 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.84■□□□□ 0.45
NKX6-1P78426 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.84■□□□□ 0.45
NKX6-1P78426 FAM21FP-204ENST00000608637 956 ntBASIC17.84■□□□□ 0.45
NKX6-1P78426 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-1P78426 AC073648.6-201ENST00000641589 218 ntBASIC17.84■□□□□ 0.45
NKX6-1P78426 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-1P78426 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.84■□□□□ 0.45
NKX6-1P78426 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-1P78426 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.84■□□□□ 0.45
NKX6-1P78426 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.84■□□□□ 0.45
NKX6-1P78426 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NKX6-1P78426 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NKX6-1P78426 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
NKX6-1P78426 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.83■□□□□ 0.45
NKX6-1P78426 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NKX6-1P78426 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.83■□□□□ 0.45
NKX6-1P78426 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.83■□□□□ 0.45
NKX6-1P78426 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NKX6-1P78426 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NKX6-1P78426 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NKX6-1P78426 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NKX6-1P78426 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NKX6-1P78426 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NKX6-1P78426 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.83■□□□□ 0.44
NKX6-1P78426 CDV3P1-201ENST00000471403 739 ntBASIC17.83■□□□□ 0.44
NKX6-1P78426 AC008550.1-201ENST00000511500 884 ntBASIC17.83■□□□□ 0.44
NKX6-1P78426 AP003097.1-201ENST00000530657 1135 ntBASIC17.83■□□□□ 0.44
NKX6-1P78426 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.83■□□□□ 0.44
NKX6-1P78426 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.83■□□□□ 0.44
NKX6-1P78426 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
NKX6-1P78426 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NKX6-1P78426 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NKX6-1P78426 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NKX6-1P78426 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
NKX6-1P78426 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.83■□□□□ 0.44
NKX6-1P78426 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.83■□□□□ 0.44
NKX6-1P78426 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.82■□□□□ 0.44
NKX6-1P78426 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.82■□□□□ 0.44
NKX6-1P78426 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NKX6-1P78426 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NKX6-1P78426 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NKX6-1P78426 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NKX6-1P78426 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NKX6-1P78426 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.82■□□□□ 0.44
NKX6-1P78426 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.82■□□□□ 0.44
NKX6-1P78426 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
NKX6-1P78426 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NKX6-1P78426 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.82■□□□□ 0.44
NKX6-1P78426 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NKX6-1P78426 UBE2SP1-201ENST00000450587 669 ntBASIC17.82■□□□□ 0.44
NKX6-1P78426 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.82■□□□□ 0.44
NKX6-1P78426 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.82■□□□□ 0.44
NKX6-1P78426 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.82■□□□□ 0.44
NKX6-1P78426 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NKX6-1P78426 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.82■□□□□ 0.44
NKX6-1P78426 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.82■□□□□ 0.44
NKX6-1P78426 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NKX6-1P78426 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NKX6-1P78426 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.82■□□□□ 0.44
NKX6-1P78426 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NKX6-1P78426 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NKX6-1P78426 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NKX6-1P78426 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NKX6-1P78426 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.82■□□□□ 0.44
NKX6-1P78426 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX6-1P78426 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NKX6-1P78426 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NKX6-1P78426 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX6-1P78426 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.81■□□□□ 0.44
NKX6-1P78426 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX6-1P78426 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX6-1P78426 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.81■□□□□ 0.44
NKX6-1P78426 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NKX6-1P78426 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX6-1P78426 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX6-1P78426 LSM12P1-201ENST00000411836 588 ntBASIC17.81■□□□□ 0.44
NKX6-1P78426 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.81■□□□□ 0.44
NKX6-1P78426 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.81■□□□□ 0.44
NKX6-1P78426 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX6-1P78426 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.81■□□□□ 0.44
NKX6-1P78426 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX6-1P78426 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.81■□□□□ 0.44
NKX6-1P78426 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX6-1P78426 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NKX6-1P78426 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NKX6-1P78426 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.8■□□□□ 0.44
NKX6-1P78426 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms