Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
UBA52P62987 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA52P62987 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA52P62987 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA52P62987 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA52P62987 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBA52P62987 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBA52P62987 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA52P62987 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA52P62987 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
UBA52P62987 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA52P62987 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.43■□□□□ 0.38
UBA52P62987 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBA52P62987 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.43■□□□□ 0.38
UBA52P62987 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
UBA52P62987 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.43■□□□□ 0.38
UBA52P62987 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA52P62987 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA52P62987 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA52P62987 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA52P62987 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.43■□□□□ 0.38
UBA52P62987 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.43■□□□□ 0.38
UBA52P62987 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA52P62987 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA52P62987 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBA52P62987 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA52P62987 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
UBA52P62987 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA52P62987 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBA52P62987 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UBA52P62987 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA52P62987 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA52P62987 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBA52P62987 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
UBA52P62987 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
UBA52P62987 AC073314.1-201ENST00000568729 2216 ntBASIC17.42■□□□□ 0.38
UBA52P62987 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA52P62987 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA52P62987 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA52P62987 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UBA52P62987 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.42■□□□□ 0.38
UBA52P62987 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA52P62987 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
UBA52P62987 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.42■□□□□ 0.38
UBA52P62987 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.42■□□□□ 0.38
UBA52P62987 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA52P62987 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.42■□□□□ 0.38
UBA52P62987 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.42■□□□□ 0.38
UBA52P62987 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBA52P62987 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
UBA52P62987 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBA52P62987 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.41■□□□□ 0.38
UBA52P62987 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBA52P62987 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBA52P62987 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.41■□□□□ 0.38
UBA52P62987 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.41■□□□□ 0.38
UBA52P62987 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.41■□□□□ 0.38
UBA52P62987 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBA52P62987 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBA52P62987 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.41■□□□□ 0.38
UBA52P62987 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
UBA52P62987 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBA52P62987 GPX1P1-201ENST00000388829 606 ntBASIC17.41■□□□□ 0.38
UBA52P62987 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.41■□□□□ 0.38
UBA52P62987 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.41■□□□□ 0.38
UBA52P62987 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.41■□□□□ 0.38
UBA52P62987 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBA52P62987 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBA52P62987 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBA52P62987 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBA52P62987 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.41■□□□□ 0.38
UBA52P62987 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.4■□□□□ 0.38
UBA52P62987 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA52P62987 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA52P62987 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA52P62987 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA52P62987 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBA52P62987 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA52P62987 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA52P62987 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
UBA52P62987 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.4■□□□□ 0.38
UBA52P62987 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UBA52P62987 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UBA52P62987 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.4■□□□□ 0.38
UBA52P62987 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBA52P62987 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBA52P62987 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
UBA52P62987 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.4■□□□□ 0.38
UBA52P62987 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA52P62987 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA52P62987 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA52P62987 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA52P62987 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA52P62987 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA52P62987 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA52P62987 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.4■□□□□ 0.38
UBA52P62987 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA52P62987 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
UBA52P62987 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
UBA52P62987 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms