Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
EIF4A1P60842 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
EIF4A1P60842 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
EIF4A1P60842 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
EIF4A1P60842 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
EIF4A1P60842 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
EIF4A1P60842 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
EIF4A1P60842 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
EIF4A1P60842 C1QBPP2-201ENST00000528754 825 ntBASIC26.13■■□□□ 1.77
EIF4A1P60842 AL121603.2-201ENST00000557373 2117 ntBASIC26.13■■□□□ 1.77
EIF4A1P60842 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
EIF4A1P60842 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
EIF4A1P60842 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
EIF4A1P60842 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
EIF4A1P60842 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC26.12■■□□□ 1.77
EIF4A1P60842 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
EIF4A1P60842 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
EIF4A1P60842 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
EIF4A1P60842 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
EIF4A1P60842 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
EIF4A1P60842 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
EIF4A1P60842 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
EIF4A1P60842 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
EIF4A1P60842 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC26.12■■□□□ 1.77
EIF4A1P60842 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
EIF4A1P60842 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC26.12■■□□□ 1.77
EIF4A1P60842 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC26.12■■□□□ 1.77
EIF4A1P60842 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
EIF4A1P60842 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
EIF4A1P60842 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
EIF4A1P60842 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
EIF4A1P60842 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
EIF4A1P60842 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC26.11■■□□□ 1.77
EIF4A1P60842 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC26.11■■□□□ 1.77
EIF4A1P60842 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.11■■□□□ 1.77
EIF4A1P60842 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC26.11■■□□□ 1.77
EIF4A1P60842 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC26.11■■□□□ 1.77
EIF4A1P60842 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
EIF4A1P60842 MTDHP1-201ENST00000605323 784 ntBASIC26.11■■□□□ 1.77
EIF4A1P60842 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC26.11■■□□□ 1.77
EIF4A1P60842 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
EIF4A1P60842 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC26.11■■□□□ 1.77
EIF4A1P60842 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
EIF4A1P60842 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
EIF4A1P60842 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
EIF4A1P60842 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC26.1■■□□□ 1.77
EIF4A1P60842 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
EIF4A1P60842 BAALC-201ENST00000297574 801 ntTSL 3 BASIC26.1■■□□□ 1.77
EIF4A1P60842 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
EIF4A1P60842 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
EIF4A1P60842 HES2-206ENST00000489730 730 ntTSL 2 BASIC26.1■■□□□ 1.77
EIF4A1P60842 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
EIF4A1P60842 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
EIF4A1P60842 AP006294.2-201ENST00000641667 209 ntBASIC26.1■■□□□ 1.77
EIF4A1P60842 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
EIF4A1P60842 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
EIF4A1P60842 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
EIF4A1P60842 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC26.1■■□□□ 1.77
EIF4A1P60842 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC26.09■■□□□ 1.77
EIF4A1P60842 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC26.09■■□□□ 1.77
EIF4A1P60842 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
EIF4A1P60842 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC26.09■■□□□ 1.77
EIF4A1P60842 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
EIF4A1P60842 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC26.09■■□□□ 1.77
EIF4A1P60842 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC26.09■■□□□ 1.77
EIF4A1P60842 RER1-204ENST00000378518 522 ntTSL 3 BASIC26.09■■□□□ 1.77
EIF4A1P60842 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC26.09■■□□□ 1.77
EIF4A1P60842 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC26.09■■□□□ 1.77
EIF4A1P60842 UBE2SP1-201ENST00000450587 669 ntBASIC26.09■■□□□ 1.77
EIF4A1P60842 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.09■■□□□ 1.77
EIF4A1P60842 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
EIF4A1P60842 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC26.09■■□□□ 1.77
EIF4A1P60842 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC26.09■■□□□ 1.77
EIF4A1P60842 USP36-216ENST00000589424 970 ntTSL 5 BASIC26.09■■□□□ 1.77
EIF4A1P60842 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.09■■□□□ 1.77
EIF4A1P60842 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC26.09■■□□□ 1.77
EIF4A1P60842 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
EIF4A1P60842 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC26.09■■□□□ 1.77
EIF4A1P60842 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC26.09■■□□□ 1.77
EIF4A1P60842 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
EIF4A1P60842 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
EIF4A1P60842 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
EIF4A1P60842 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.08■■□□□ 1.77
EIF4A1P60842 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
EIF4A1P60842 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC26.08■■□□□ 1.77
EIF4A1P60842 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC26.08■■□□□ 1.77
EIF4A1P60842 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
EIF4A1P60842 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
EIF4A1P60842 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
EIF4A1P60842 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC26.08■■□□□ 1.77
EIF4A1P60842 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
EIF4A1P60842 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC26.08■■□□□ 1.77
EIF4A1P60842 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
EIF4A1P60842 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC26.08■■□□□ 1.77
EIF4A1P60842 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
EIF4A1P60842 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
EIF4A1P60842 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
EIF4A1P60842 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC26.07■■□□□ 1.76
EIF4A1P60842 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC26.07■■□□□ 1.76
EIF4A1P60842 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC26.07■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms