Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
CLDN18P56856 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN18P56856 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN18P56856 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN18P56856 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN18P56856 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN18P56856 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN18P56856 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN18P56856 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN18P56856 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN18P56856 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CLDN18P56856 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN18P56856 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN18P56856 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN18P56856 AL121603.2-201ENST00000557373 2117 ntBASIC18.18■□□□□ 0.5
CLDN18P56856 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.18■□□□□ 0.5
CLDN18P56856 AC008403.3-201ENST00000598924 454 ntBASIC18.18■□□□□ 0.5
CLDN18P56856 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN18P56856 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLDN18P56856 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN18P56856 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN18P56856 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN18P56856 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN18P56856 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN18P56856 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN18P56856 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN18P56856 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN18P56856 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN18P56856 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN18P56856 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN18P56856 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN18P56856 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN18P56856 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN18P56856 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN18P56856 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CLDN18P56856 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN18P56856 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.17■□□□□ 0.5
CLDN18P56856 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.17■□□□□ 0.5
CLDN18P56856 UNC93B4-201ENST00000505679 747 ntBASIC18.17■□□□□ 0.5
CLDN18P56856 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN18P56856 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN18P56856 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN18P56856 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CLDN18P56856 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CLDN18P56856 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN18P56856 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN18P56856 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN18P56856 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN18P56856 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN18P56856 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN18P56856 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN18P56856 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN18P56856 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN18P56856 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CLDN18P56856 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN18P56856 SOX15-203ENST00000570788 1093 ntBASIC18.16■□□□□ 0.5
CLDN18P56856 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
CLDN18P56856 AC006058.3-201ENST00000606217 1069 ntBASIC18.16■□□□□ 0.5
CLDN18P56856 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN18P56856 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLDN18P56856 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN18P56856 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN18P56856 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN18P56856 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN18P56856 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN18P56856 FP700111.2-201ENST00000619190 1892 ntBASIC18.16■□□□□ 0.5
CLDN18P56856 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN18P56856 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN18P56856 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
CLDN18P56856 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN18P56856 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN18P56856 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN18P56856 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CLDN18P56856 KRT18P29-201ENST00000397031 1267 ntBASIC18.15■□□□□ 0.5
CLDN18P56856 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN18P56856 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN18P56856 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN18P56856 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN18P56856 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN18P56856 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CLDN18P56856 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN18P56856 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN18P56856 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN18P56856 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN18P56856 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLDN18P56856 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
CLDN18P56856 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CLDN18P56856 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN18P56856 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN18P56856 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN18P56856 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN18P56856 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN18P56856 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN18P56856 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN18P56856 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN18P56856 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN18P56856 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN18P56856 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN18P56856 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN18P56856 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms