Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3P56703 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.23■□□□□ 0.67
WNT3P56703 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3P56703 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3P56703 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.23■□□□□ 0.67
WNT3P56703 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3P56703 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.23■□□□□ 0.67
WNT3P56703 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3P56703 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3P56703 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.23■□□□□ 0.67
WNT3P56703 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3P56703 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3P56703 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3P56703 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
WNT3P56703 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3P56703 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.23■□□□□ 0.67
WNT3P56703 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3P56703 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3P56703 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3P56703 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3P56703 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3P56703 KRT19P1-201ENST00000405746 1186 ntBASIC19.22■□□□□ 0.67
WNT3P56703 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.22■□□□□ 0.67
WNT3P56703 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
WNT3P56703 UBE2DNL-204ENST00000602536 740 ntBASIC19.22■□□□□ 0.67
WNT3P56703 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.22■□□□□ 0.67
WNT3P56703 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3P56703 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3P56703 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3P56703 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.22■□□□□ 0.67
WNT3P56703 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3P56703 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.22■□□□□ 0.67
WNT3P56703 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3P56703 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3P56703 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
WNT3P56703 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
WNT3P56703 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
WNT3P56703 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
WNT3P56703 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
WNT3P56703 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
WNT3P56703 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
WNT3P56703 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
WNT3P56703 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
WNT3P56703 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.21■□□□□ 0.67
WNT3P56703 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.21■□□□□ 0.67
WNT3P56703 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
WNT3P56703 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.21■□□□□ 0.67
WNT3P56703 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.21■□□□□ 0.67
WNT3P56703 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
WNT3P56703 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
WNT3P56703 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
WNT3P56703 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
WNT3P56703 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
WNT3P56703 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
WNT3P56703 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
WNT3P56703 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.21■□□□□ 0.67
WNT3P56703 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.2■□□□□ 0.66
WNT3P56703 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
WNT3P56703 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.2■□□□□ 0.66
WNT3P56703 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
WNT3P56703 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
WNT3P56703 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.2■□□□□ 0.66
WNT3P56703 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.2■□□□□ 0.66
WNT3P56703 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
WNT3P56703 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
WNT3P56703 AC073111.5-205ENST00000641717 521 ntBASIC19.2■□□□□ 0.66
WNT3P56703 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
WNT3P56703 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.2■□□□□ 0.66
WNT3P56703 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.2■□□□□ 0.66
WNT3P56703 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
WNT3P56703 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
WNT3P56703 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
WNT3P56703 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
WNT3P56703 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
WNT3P56703 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
WNT3P56703 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.19■□□□□ 0.66
WNT3P56703 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
WNT3P56703 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
WNT3P56703 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
WNT3P56703 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
WNT3P56703 MYCNOS-205ENST00000641950 531 ntBASIC19.19■□□□□ 0.66
WNT3P56703 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
WNT3P56703 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
WNT3P56703 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
WNT3P56703 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
WNT3P56703 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
WNT3P56703 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
WNT3P56703 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
WNT3P56703 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.19■□□□□ 0.66
WNT3P56703 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
WNT3P56703 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.19■□□□□ 0.66
WNT3P56703 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
WNT3P56703 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.18■□□□□ 0.66
WNT3P56703 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
WNT3P56703 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
WNT3P56703 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.18■□□□□ 0.66
WNT3P56703 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
WNT3P56703 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
WNT3P56703 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.18■□□□□ 0.66
WNT3P56703 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms