Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMSP52788 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMSP52788 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMSP52788 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMSP52788 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMSP52788 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.97■□□□□ 0.63
SMSP52788 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMSP52788 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
SMSP52788 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.97■□□□□ 0.63
SMSP52788 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.97■□□□□ 0.63
SMSP52788 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.97■□□□□ 0.63
SMSP52788 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.97■□□□□ 0.63
SMSP52788 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SMSP52788 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SMSP52788 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMSP52788 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMSP52788 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMSP52788 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.97■□□□□ 0.63
SMSP52788 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMSP52788 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.96■□□□□ 0.63
SMSP52788 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.96■□□□□ 0.63
SMSP52788 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
SMSP52788 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMSP52788 KRT18P29-201ENST00000397031 1267 ntBASIC18.96■□□□□ 0.63
SMSP52788 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMSP52788 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMSP52788 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.96■□□□□ 0.63
SMSP52788 SLC7A5P1-201ENST00000568957 537 ntBASIC18.96■□□□□ 0.63
SMSP52788 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.96■□□□□ 0.63
SMSP52788 AC008694.1-202ENST00000636953 945 ntBASIC18.96■□□□□ 0.63
SMSP52788 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMSP52788 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.96■□□□□ 0.63
SMSP52788 AC121338.2-201ENST00000622535 1744 ntBASIC18.96■□□□□ 0.63
SMSP52788 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.96■□□□□ 0.63
SMSP52788 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMSP52788 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMSP52788 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMSP52788 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SMSP52788 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.96■□□□□ 0.63
SMSP52788 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SMSP52788 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMSP52788 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMSP52788 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMSP52788 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SMSP52788 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.95■□□□□ 0.62
SMSP52788 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMSP52788 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SMSP52788 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMSP52788 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMSP52788 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMSP52788 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMSP52788 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMSP52788 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SMSP52788 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMSP52788 POU5F1P3-201ENST00000428824 1078 ntBASIC18.95■□□□□ 0.62
SMSP52788 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.95■□□□□ 0.62
SMSP52788 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SMSP52788 TERF1P5-201ENST00000477545 1207 ntBASIC18.95■□□□□ 0.62
SMSP52788 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.95■□□□□ 0.62
SMSP52788 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SMSP52788 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.95■□□□□ 0.62
SMSP52788 AL391422.3-201ENST00000603791 2761 ntBASIC18.95■□□□□ 0.62
SMSP52788 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMSP52788 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMSP52788 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMSP52788 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SMSP52788 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMSP52788 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMSP52788 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.94■□□□□ 0.62
SMSP52788 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMSP52788 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SMSP52788 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SMSP52788 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMSP52788 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
SMSP52788 AC093827.2-201ENST00000512654 315 ntBASIC18.94■□□□□ 0.62
SMSP52788 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.94■□□□□ 0.62
SMSP52788 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
SMSP52788 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMSP52788 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SMSP52788 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMSP52788 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMSP52788 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.94■□□□□ 0.62
SMSP52788 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMSP52788 MKRN4P-201ENST00000444706 1521 ntBASIC18.94■□□□□ 0.62
SMSP52788 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMSP52788 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMSP52788 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
SMSP52788 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMSP52788 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SMSP52788 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMSP52788 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.93■□□□□ 0.62
SMSP52788 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.93■□□□□ 0.62
SMSP52788 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SMSP52788 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.93■□□□□ 0.62
SMSP52788 RNA5SP413-201ENST00000516373 109 ntBASIC18.93■□□□□ 0.62
SMSP52788 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SMSP52788 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.93■□□□□ 0.62
SMSP52788 ITM2C-210ENST00000620962 501 ntBASIC18.93■□□□□ 0.62
SMSP52788 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMSP52788 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms