Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
POLR2JP52435 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
POLR2JP52435 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2JP52435 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.41■□□□□ 0.7
POLR2JP52435 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.41■□□□□ 0.7
POLR2JP52435 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
POLR2JP52435 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR2JP52435 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.41■□□□□ 0.7
POLR2JP52435 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.41■□□□□ 0.7
POLR2JP52435 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.41■□□□□ 0.7
POLR2JP52435 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2JP52435 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
POLR2JP52435 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.41■□□□□ 0.7
POLR2JP52435 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
POLR2JP52435 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2JP52435 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2JP52435 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
POLR2JP52435 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2JP52435 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2JP52435 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2JP52435 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2JP52435 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
POLR2JP52435 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.4■□□□□ 0.7
POLR2JP52435 IRS3P-201ENST00000223076 1006 ntBASIC19.4■□□□□ 0.7
POLR2JP52435 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2JP52435 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2JP52435 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.4■□□□□ 0.7
POLR2JP52435 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.4■□□□□ 0.7
POLR2JP52435 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2JP52435 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.4■□□□□ 0.7
POLR2JP52435 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
POLR2JP52435 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2JP52435 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
POLR2JP52435 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2JP52435 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2JP52435 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.39■□□□□ 0.69
POLR2JP52435 AC125437.2-201ENST00000625180 2167 ntBASIC19.39■□□□□ 0.69
POLR2JP52435 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.39■□□□□ 0.69
POLR2JP52435 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2JP52435 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.39■□□□□ 0.69
POLR2JP52435 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.39■□□□□ 0.69
POLR2JP52435 SLC7A5P2-201ENST00000553010 536 ntBASIC19.39■□□□□ 0.69
POLR2JP52435 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2JP52435 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2JP52435 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2JP52435 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.39■□□□□ 0.69
POLR2JP52435 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2JP52435 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.39■□□□□ 0.69
POLR2JP52435 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2JP52435 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2JP52435 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2JP52435 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
POLR2JP52435 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2JP52435 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2JP52435 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.38■□□□□ 0.69
POLR2JP52435 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
POLR2JP52435 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.38■□□□□ 0.69
POLR2JP52435 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2JP52435 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.38■□□□□ 0.69
POLR2JP52435 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.38■□□□□ 0.69
POLR2JP52435 DUX4L2-201ENST00000561772 1275 ntBASIC19.38■□□□□ 0.69
POLR2JP52435 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
POLR2JP52435 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.38■□□□□ 0.69
POLR2JP52435 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2JP52435 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
POLR2JP52435 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
POLR2JP52435 DUX4L6-201ENST00000626483 1275 ntBASIC19.38■□□□□ 0.69
POLR2JP52435 DUX4L1-201ENST00000627662 1275 ntBASIC19.38■□□□□ 0.69
POLR2JP52435 DUX4L8-201ENST00000629013 1275 ntBASIC19.38■□□□□ 0.69
POLR2JP52435 DUX4L3-201ENST00000630187 1275 ntBASIC19.38■□□□□ 0.69
POLR2JP52435 DUX4L7-201ENST00000630678 1275 ntBASIC19.38■□□□□ 0.69
POLR2JP52435 DUX4L5-201ENST00000630834 1275 ntBASIC19.38■□□□□ 0.69
POLR2JP52435 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2JP52435 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
POLR2JP52435 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2JP52435 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
POLR2JP52435 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2JP52435 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2JP52435 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2JP52435 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2JP52435 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
POLR2JP52435 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
POLR2JP52435 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
POLR2JP52435 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.37■□□□□ 0.69
POLR2JP52435 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
POLR2JP52435 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR2JP52435 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR2JP52435 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
POLR2JP52435 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR2JP52435 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2JP52435 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.36■□□□□ 0.69
POLR2JP52435 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2JP52435 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2JP52435 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2JP52435 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2JP52435 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
POLR2JP52435 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2JP52435 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.36■□□□□ 0.69
POLR2JP52435 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.36■□□□□ 0.69
POLR2JP52435 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms