Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TUBP50607 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TUBP50607 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TUBP50607 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TUBP50607 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TUBP50607 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.38■■□□□ 1.01
TUBP50607 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.38■■□□□ 1.01
TUBP50607 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TUBP50607 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TUBP50607 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TUBP50607 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TUBP50607 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBP50607 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TUBP50607 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.37■■□□□ 1.01
TUBP50607 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TUBP50607 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBP50607 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBP50607 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBP50607 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBP50607 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBP50607 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBP50607 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBP50607 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.37■■□□□ 1.01
TUBP50607 POU5F1P3-201ENST00000428824 1078 ntBASIC21.37■■□□□ 1.01
TUBP50607 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TUBP50607 FAM201B-201ENST00000458407 597 ntBASIC21.37■■□□□ 1.01
TUBP50607 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.37■■□□□ 1.01
TUBP50607 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
TUBP50607 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TUBP50607 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.37■■□□□ 1.01
TUBP50607 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.37■■□□□ 1.01
TUBP50607 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBP50607 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBP50607 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.37■■□□□ 1.01
TUBP50607 TMEM191A-211ENST00000637163 1067 ntBASIC21.37■■□□□ 1.01
TUBP50607 HLA-B-256ENST00000639848 1089 ntBASIC21.37■■□□□ 1.01
TUBP50607 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TUBP50607 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBP50607 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBP50607 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.37■■□□□ 1.01
TUBP50607 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TUBP50607 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TUBP50607 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TUBP50607 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.36■■□□□ 1.01
TUBP50607 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.36■■□□□ 1.01
TUBP50607 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.36■■□□□ 1.01
TUBP50607 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.36■■□□□ 1.01
TUBP50607 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
TUBP50607 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.36■■□□□ 1.01
TUBP50607 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.36■■□□□ 1.01
TUBP50607 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.36■■□□□ 1.01
TUBP50607 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TUBP50607 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TUBP50607 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TUBP50607 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TUBP50607 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
TUBP50607 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.35■■□□□ 1.01
TUBP50607 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.35■■□□□ 1.01
TUBP50607 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.35■■□□□ 1.01
TUBP50607 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TUBP50607 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.35■■□□□ 1.01
TUBP50607 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.35■■□□□ 1.01
TUBP50607 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.35■■□□□ 1.01
TUBP50607 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TUBP50607 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TUBP50607 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TUBP50607 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TUBP50607 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TUBP50607 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TUBP50607 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TUBP50607 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TUBP50607 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TUBP50607 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TUBP50607 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TUBP50607 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.34■■□□□ 1.01
TUBP50607 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.34■■□□□ 1.01
TUBP50607 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TUBP50607 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.34■■□□□ 1.01
TUBP50607 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.34■■□□□ 1.01
TUBP50607 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TUBP50607 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.34■■□□□ 1.01
TUBP50607 AC060766.5-201ENST00000590539 871 ntBASIC21.34■■□□□ 1.01
TUBP50607 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.34■■□□□ 1.01
TUBP50607 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TUBP50607 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TUBP50607 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TUBP50607 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TUBP50607 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.33■■□□□ 1.01
TUBP50607 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TUBP50607 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.33■■□□□ 1.01
TUBP50607 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TUBP50607 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.33■■□□□ 1.01
TUBP50607 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TUBP50607 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TUBP50607 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TUBP50607 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TUBP50607 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.33■■□□□ 1.01
TUBP50607 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.33■■□□□ 1.01
TUBP50607 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.33■■□□□ 1.01
TUBP50607 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms