Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.07■□□□□ 0.48
CSNK1A1P48729 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.07■□□□□ 0.48
CSNK1A1P48729 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.07■□□□□ 0.48
CSNK1A1P48729 AP005212.1-201ENST00000581547 1997 ntBASIC18.07■□□□□ 0.48
CSNK1A1P48729 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSNK1A1P48729 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSNK1A1P48729 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CSNK1A1P48729 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CSNK1A1P48729 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CSNK1A1P48729 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.07■□□□□ 0.48
CSNK1A1P48729 AC087633.2-202ENST00000565166 1439 ntBASIC18.06■□□□□ 0.48
CSNK1A1P48729 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.06■□□□□ 0.48
CSNK1A1P48729 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1A1P48729 AC092720.2-201ENST00000602388 1665 ntBASIC18.06■□□□□ 0.48
CSNK1A1P48729 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CSNK1A1P48729 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1A1P48729 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1A1P48729 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1A1P48729 GABARAPL3-202ENST00000624044 1851 ntBASIC18.06■□□□□ 0.48
CSNK1A1P48729 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1A1P48729 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.06■□□□□ 0.48
CSNK1A1P48729 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1A1P48729 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1A1P48729 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.06■□□□□ 0.48
CSNK1A1P48729 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.06■□□□□ 0.48
CSNK1A1P48729 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CSNK1A1P48729 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1A1P48729 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1A1P48729 LINC01006-201ENST00000333319 2292 ntBASIC18.06■□□□□ 0.48
CSNK1A1P48729 KRT8P36-201ENST00000489121 1440 ntBASIC18.06■□□□□ 0.48
CSNK1A1P48729 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1A1P48729 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CSNK1A1P48729 LINC01521-201ENST00000504184 1943 ntBASIC18.06■□□□□ 0.48
CSNK1A1P48729 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CSNK1A1P48729 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSNK1A1P48729 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSNK1A1P48729 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSNK1A1P48729 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSNK1A1P48729 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.05■□□□□ 0.48
CSNK1A1P48729 CDCA4P2-201ENST00000441182 718 ntBASIC18.05■□□□□ 0.48
CSNK1A1P48729 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.05■□□□□ 0.48
CSNK1A1P48729 AC026185.1-201ENST00000445748 174 ntBASIC18.05■□□□□ 0.48
CSNK1A1P48729 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.05■□□□□ 0.48
CSNK1A1P48729 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CSNK1A1P48729 AC100791.3-201ENST00000617619 330 ntBASIC18.05■□□□□ 0.48
CSNK1A1P48729 OR10C1-204ENST00000622521 1039 ntBASIC18.05■□□□□ 0.48
CSNK1A1P48729 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CSNK1A1P48729 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CSNK1A1P48729 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSNK1A1P48729 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CSNK1A1P48729 AC020907.5-201ENST00000624372 1936 ntBASIC18.05■□□□□ 0.48
CSNK1A1P48729 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSNK1A1P48729 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.05■□□□□ 0.48
CSNK1A1P48729 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CSNK1A1P48729 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CSNK1A1P48729 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSNK1A1P48729 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1A1P48729 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.04■□□□□ 0.48
CSNK1A1P48729 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CSNK1A1P48729 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CSNK1A1P48729 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
CSNK1A1P48729 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1A1P48729 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1A1P48729 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1A1P48729 MCRIP2P1-201ENST00000394346 511 ntBASIC18.04■□□□□ 0.48
CSNK1A1P48729 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1A1P48729 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CSNK1A1P48729 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.04■□□□□ 0.48
CSNK1A1P48729 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.04■□□□□ 0.48
CSNK1A1P48729 AL356652.1-201ENST00000615962 565 ntBASIC18.04■□□□□ 0.48
CSNK1A1P48729 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1A1P48729 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1A1P48729 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.04■□□□□ 0.48
CSNK1A1P48729 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.04■□□□□ 0.48
CSNK1A1P48729 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSNK1A1P48729 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.04■□□□□ 0.48
CSNK1A1P48729 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.03■□□□□ 0.48
CSNK1A1P48729 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CSNK1A1P48729 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1A1P48729 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1A1P48729 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1A1P48729 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1A1P48729 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.03■□□□□ 0.48
CSNK1A1P48729 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CSNK1A1P48729 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1A1P48729 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1A1P48729 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.03■□□□□ 0.48
CSNK1A1P48729 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1A1P48729 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.03■□□□□ 0.48
CSNK1A1P48729 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.03■□□□□ 0.48
CSNK1A1P48729 AC092666.2-201ENST00000613287 246 ntBASIC18.03■□□□□ 0.48
CSNK1A1P48729 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.03■□□□□ 0.48
CSNK1A1P48729 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1A1P48729 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.03■□□□□ 0.48
CSNK1A1P48729 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1A1P48729 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1A1P48729 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1A1P48729 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSNK1A1P48729 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSNK1A1P48729 AC092667.1-201ENST00000434301 2586 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms