Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A12P48065 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A12P48065 SMG8-203ENST00000578922 2178 ntBASIC19.66■□□□□ 0.74
SLC6A12P48065 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A12P48065 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A12P48065 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC6A12P48065 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC6A12P48065 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A12P48065 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A12P48065 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC6A12P48065 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC6A12P48065 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A12P48065 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC6A12P48065 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC6A12P48065 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A12P48065 AC073111.5-205ENST00000641717 521 ntBASIC19.65■□□□□ 0.74
SLC6A12P48065 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC6A12P48065 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A12P48065 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC6A12P48065 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A12P48065 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC6A12P48065 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC6A12P48065 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC6A12P48065 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A12P48065 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
SLC6A12P48065 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC6A12P48065 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC6A12P48065 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC6A12P48065 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A12P48065 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC6A12P48065 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.64■□□□□ 0.73
SLC6A12P48065 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC6A12P48065 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A12P48065 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.64■□□□□ 0.73
SLC6A12P48065 AL137784.2-201ENST00000607332 1000 ntBASIC19.64■□□□□ 0.73
SLC6A12P48065 OR10C1-204ENST00000622521 1039 ntBASIC19.64■□□□□ 0.73
SLC6A12P48065 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A12P48065 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A12P48065 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC6A12P48065 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC6A12P48065 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC6A12P48065 DPP3P2-201ENST00000416030 1696 ntBASIC19.64■□□□□ 0.73
SLC6A12P48065 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC6A12P48065 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SLC6A12P48065 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A12P48065 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A12P48065 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A12P48065 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
SLC6A12P48065 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A12P48065 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SLC6A12P48065 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A12P48065 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A12P48065 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SLC6A12P48065 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC6A12P48065 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SLC6A12P48065 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A12P48065 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC6A12P48065 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC6A12P48065 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.63■□□□□ 0.73
SLC6A12P48065 CDCA4P2-201ENST00000441182 718 ntBASIC19.63■□□□□ 0.73
SLC6A12P48065 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC6A12P48065 AC005181.1-201ENST00000604782 1256 ntBASIC19.63■□□□□ 0.73
SLC6A12P48065 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A12P48065 AC008694.1-202ENST00000636953 945 ntBASIC19.63■□□□□ 0.73
SLC6A12P48065 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
SLC6A12P48065 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A12P48065 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A12P48065 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC6A12P48065 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A12P48065 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC6A12P48065 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A12P48065 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A12P48065 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A12P48065 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC6A12P48065 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC6A12P48065 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A12P48065 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A12P48065 CYP2T3P-201ENST00000601990 817 ntBASIC19.62■□□□□ 0.73
SLC6A12P48065 RAP2CP1-201ENST00000605103 478 ntBASIC19.62■□□□□ 0.73
SLC6A12P48065 AC105020.6-201ENST00000621523 1217 ntBASIC19.62■□□□□ 0.73
SLC6A12P48065 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC6A12P48065 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A12P48065 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A12P48065 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A12P48065 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A12P48065 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A12P48065 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.62■□□□□ 0.73
SLC6A12P48065 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC6A12P48065 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A12P48065 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SLC6A12P48065 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A12P48065 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A12P48065 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC6A12P48065 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC6A12P48065 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A12P48065 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A12P48065 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC6A12P48065 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC6A12P48065 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A12P48065 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms