Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.52■■□□□ 1.04
SSR1P43307 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSR1P43307 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSR1P43307 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SSR1P43307 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SSR1P43307 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSR1P43307 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SSR1P43307 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
SSR1P43307 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SSR1P43307 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SSR1P43307 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SSR1P43307 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.52■■□□□ 1.03
SSR1P43307 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.52■■□□□ 1.03
SSR1P43307 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.51■■□□□ 1.03
SSR1P43307 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.51■■□□□ 1.03
SSR1P43307 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SSR1P43307 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSR1P43307 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSR1P43307 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.51■■□□□ 1.03
SSR1P43307 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.51■■□□□ 1.03
SSR1P43307 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.51■■□□□ 1.03
SSR1P43307 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SSR1P43307 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.51■■□□□ 1.03
SSR1P43307 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
SSR1P43307 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SSR1P43307 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSR1P43307 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.5■■□□□ 1.03
SSR1P43307 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSR1P43307 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SSR1P43307 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.5■■□□□ 1.03
SSR1P43307 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.5■■□□□ 1.03
SSR1P43307 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.5■■□□□ 1.03
SSR1P43307 NTF6G-201ENST00000591094 616 ntBASIC21.5■■□□□ 1.03
SSR1P43307 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SSR1P43307 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
SSR1P43307 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSR1P43307 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SSR1P43307 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.5■■□□□ 1.03
SSR1P43307 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.5■■□□□ 1.03
SSR1P43307 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.5■■□□□ 1.03
SSR1P43307 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSR1P43307 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSR1P43307 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.5■■□□□ 1.03
SSR1P43307 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSR1P43307 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.5■■□□□ 1.03
SSR1P43307 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SSR1P43307 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SSR1P43307 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.49■■□□□ 1.03
SSR1P43307 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSR1P43307 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SSR1P43307 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SSR1P43307 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSR1P43307 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.49■■□□□ 1.03
SSR1P43307 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSR1P43307 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSR1P43307 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.49■■□□□ 1.03
SSR1P43307 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.49■■□□□ 1.03
SSR1P43307 KRT18P61-201ENST00000585825 1298 ntBASIC21.49■■□□□ 1.03
SSR1P43307 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.49■■□□□ 1.03
SSR1P43307 UBE2DNL-204ENST00000602536 740 ntBASIC21.49■■□□□ 1.03
SSR1P43307 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSR1P43307 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSR1P43307 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.49■■□□□ 1.03
SSR1P43307 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SSR1P43307 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSR1P43307 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSR1P43307 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSR1P43307 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSR1P43307 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSR1P43307 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSR1P43307 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
SSR1P43307 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSR1P43307 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.48■■□□□ 1.03
SSR1P43307 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SSR1P43307 AC034268.1-201ENST00000441047 882 ntBASIC21.48■■□□□ 1.03
SSR1P43307 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.48■■□□□ 1.03
SSR1P43307 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.48■■□□□ 1.03
SSR1P43307 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSR1P43307 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSR1P43307 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSR1P43307 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSR1P43307 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SSR1P43307 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSR1P43307 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SSR1P43307 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SSR1P43307 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SSR1P43307 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
SSR1P43307 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSR1P43307 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSR1P43307 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSR1P43307 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSR1P43307 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.47■■□□□ 1.03
SSR1P43307 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SSR1P43307 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSR1P43307 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
SSR1P43307 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SSR1P43307 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.47■■□□□ 1.03
SSR1P43307 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.47■■□□□ 1.03
SSR1P43307 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SSR1P43307 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms