Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 SAP1YER047C 2694 nt2.79□□□□□ -1.96
TDP1P38319 YOR296WYOR296W 3870 nt2.79□□□□□ -1.96
TDP1P38319 snR55snR55 98 nt2.79□□□□□ -1.96
TDP1P38319 RPS17BYDR447C 411 nt2.79□□□□□ -1.96
TDP1P38319 PNC1YGL037C 651 nt2.79□□□□□ -1.96
TDP1P38319 YIL032CYIL032C 357 nt2.79□□□□□ -1.96
TDP1P38319 YIL058WYIL058W 285 nt2.79□□□□□ -1.96
TDP1P38319 RPS18BYML026C 441 nt2.79□□□□□ -1.96
TDP1P38319 RPL32YBL092W 393 nt2.79□□□□□ -1.96
TDP1P38319 YPR203WYPR203W 309 nt2.79□□□□□ -1.96
TDP1P38319 YPK1YKL126W 2043 nt2.79□□□□□ -1.96
TDP1P38319 CDC24YAL041W 2565 nt2.79□□□□□ -1.96
TDP1P38319 YNL034WYNL034W 1839 nt2.79□□□□□ -1.96
TDP1P38319 ILS1YBL076C 3219 nt2.79□□□□□ -1.96
TDP1P38319 NPR3YHL023C 3441 nt2.78□□□□□ -1.96
TDP1P38319 MVP1YMR004W 1536 nt2.78□□□□□ -1.96
TDP1P38319 ROG1YGL144C 2058 nt2.78□□□□□ -1.96
TDP1P38319 MMS1YPR164W 4224 nt2.78□□□□□ -1.96
TDP1P38319 YHL042WYHL042W 453 nt2.78□□□□□ -1.96
TDP1P38319 APC9YLR102C 798 nt2.78□□□□□ -1.96
TDP1P38319 CCW14YLR390W-A 717 nt2.78□□□□□ -1.96
TDP1P38319 PRP8YHR165C 7242 nt2.78□□□□□ -1.97
TDP1P38319 YLR012CYLR012C 300 nt2.77□□□□□ -1.97
TDP1P38319 YLR342W-AYLR342W-A 174 nt2.77□□□□□ -1.97
TDP1P38319 YOR302WYOR302W 78 nt2.77□□□□□ -1.97
TDP1P38319 PUF4YGL014W 2667 nt2.76□□□□□ -1.97
TDP1P38319 snR79snR79 84 nt2.76□□□□□ -1.97
TDP1P38319 SDH6YDR379C-A 240 nt2.76□□□□□ -1.97
TDP1P38319 GPG1YGL121C 381 nt2.76□□□□□ -1.97
TDP1P38319 YIL169CYIL169C 2988 nt2.76□□□□□ -1.97
TDP1P38319 YJL150WYJL150W 303 nt2.76□□□□□ -1.97
TDP1P38319 RPS22AYJL190C 393 nt2.76□□□□□ -1.97
TDP1P38319 YBR197CYBR197C 654 nt2.76□□□□□ -1.97
TDP1P38319 YJL181WYJL181W 1836 nt2.76□□□□□ -1.97
TDP1P38319 NFT1YKR103W 3657 nt2.76□□□□□ -1.97
TDP1P38319 CYR1YJL005W 6081 nt2.76□□□□□ -1.97
TDP1P38319 YIL166CYIL166C 1629 nt2.75□□□□□ -1.97
TDP1P38319 ECM5YMR176W 4236 nt2.75□□□□□ -1.97
TDP1P38319 snR85snR85 171 nt2.75□□□□□ -1.97
TDP1P38319 YIL020C-AYIL020C-A 339 nt2.75□□□□□ -1.97
TDP1P38319 MBB1YJL199C 327 nt2.75□□□□□ -1.97
TDP1P38319 SCW11YGL028C 1629 nt2.75□□□□□ -1.97
TDP1P38319 SKP2YNL311C 2292 nt2.75□□□□□ -1.97
TDP1P38319 RIM20YOR275C 1986 nt2.74□□□□□ -1.97
TDP1P38319 BRO1YPL084W 2535 nt2.74□□□□□ -1.97
TDP1P38319 YLR278CYLR278C 4026 nt2.74□□□□□ -1.97
TDP1P38319 YER088C-AYER088C-A 324 nt2.74□□□□□ -1.97
TDP1P38319 YGL052WYGL052W 306 nt2.74□□□□□ -1.97
TDP1P38319 TIM13YGR181W 318 nt2.74□□□□□ -1.97
TDP1P38319 PHS1YJL097W 654 nt2.74□□□□□ -1.97
TDP1P38319 YMR172C-AYMR172C-A 384 nt2.74□□□□□ -1.97
TDP1P38319 VPS64YDR200C 1815 nt2.74□□□□□ -1.97
TDP1P38319 GYP7YDL234C 2241 nt2.73□□□□□ -1.97
TDP1P38319 YDR209CYDR209C 414 nt2.73□□□□□ -1.97
TDP1P38319 LCL1YPL056C 306 nt2.73□□□□□ -1.97
TDP1P38319 YPR146CYPR146C 330 nt2.73□□□□□ -1.97
TDP1P38319 SKT5YBL061C 2091 nt2.73□□□□□ -1.97
TDP1P38319 SIN3YOL004W 4611 nt2.72□□□□□ -1.97
TDP1P38319 YER189WYER189W 369 nt2.72□□□□□ -1.97
TDP1P38319 YGL239CYGL239C 315 nt2.72□□□□□ -1.97
TDP1P38319 DUG2YBR281C 2637 nt2.72□□□□□ -1.97
TDP1P38319 DNL4YOR005C 2835 nt2.72□□□□□ -1.97
TDP1P38319 LEU3YLR451W 2661 nt2.72□□□□□ -1.97
TDP1P38319 SOK2YMR016C 2358 nt2.72□□□□□ -1.97
TDP1P38319 POL3YDL102W 3294 nt2.71□□□□□ -1.98
TDP1P38319 PRP39YML046W 1890 nt2.71□□□□□ -1.98
TDP1P38319 PAU2YEL049W 363 nt2.71□□□□□ -1.98
TDP1P38319 YER121WYER121W 345 nt2.71□□□□□ -1.98
TDP1P38319 YLR053CYLR053C 327 nt2.71□□□□□ -1.98
TDP1P38319 YMR194C-AYMR194C-A 225 nt2.71□□□□□ -1.98
TDP1P38319 RPL33AYPL143W 324 nt2.71□□□□□ -1.98
TDP1P38319 TRM7YBR061C 933 nt2.71□□□□□ -1.98
TDP1P38319 BFA1YJR053W 1725 nt2.71□□□□□ -1.98
TDP1P38319 snR76snR76 109 nt2.7□□□□□ -1.98
TDP1P38319 YIL174WYIL174W 228 nt2.7□□□□□ -1.98
TDP1P38319 YJL222W-AYJL222W-A 228 nt2.7□□□□□ -1.98
TDP1P38319 COA4YLR218C 453 nt2.7□□□□□ -1.98
TDP1P38319 YMR141W-AYMR141W-A 225 nt2.7□□□□□ -1.98
TDP1P38319 RGM1YMR182C 636 nt2.7□□□□□ -1.98
TDP1P38319 RPL36AYMR194W 303 nt2.7□□□□□ -1.98
TDP1P38319 ECM25YJL201W 1800 nt2.7□□□□□ -1.98
TDP1P38319 YKU70YMR284W 1809 nt2.7□□□□□ -1.98
TDP1P38319 FIR1YER032W 2631 nt2.7□□□□□ -1.98
TDP1P38319 VIK1YPL253C 1944 nt2.7□□□□□ -1.98
TDP1P38319 PSK2YOL045W 3306 nt2.69□□□□□ -1.98
TDP1P38319 YJL135WYJL135W 318 nt2.69□□□□□ -1.98
TDP1P38319 CYB5YNL111C 363 nt2.69□□□□□ -1.98
TDP1P38319 MET6YER091C 2304 nt2.69□□□□□ -1.98
TDP1P38319 AXL1YPR122W 3627 nt2.68□□□□□ -1.98
TDP1P38319 LCL2YLR104W 396 nt2.68□□□□□ -1.98
TDP1P38319 YNL010WYNL010W 726 nt2.68□□□□□ -1.98
TDP1P38319 FPR1YNL135C 345 nt2.68□□□□□ -1.98
TDP1P38319 SAR1YPL218W 573 nt2.68□□□□□ -1.98
TDP1P38319 BNR1YIL159W 4128 nt2.68□□□□□ -1.98
TDP1P38319 YME2YMR302C 2553 nt2.68□□□□□ -1.98
TDP1P38319 DBP10YDL031W 2988 nt2.68□□□□□ -1.98
TDP1P38319 PSO2YMR137C 1986 nt2.67□□□□□ -1.98
TDP1P38319 tF(GAA)QtF(GAA)Q 75 nt2.67□□□□□ -1.98
TDP1P38319 YHL041WYHL041W 450 nt2.67□□□□□ -1.98
TDP1P38319 YPR063CYPR063C 423 nt2.67□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms