Protein–RNA interactions for Protein: P35178

RRP1, Ribosomal RNA-processing protein 1, yeastyeast

Predicted RBP Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP1P35178 tT(UGU)Q1tT(UGU)Q1 76 nt2.03□□□□□ -2.08
RRP1P35178 VPS8YAL002W 3825 nt2.03□□□□□ -2.08
RRP1P35178 YLR053CYLR053C 327 nt2.03□□□□□ -2.08
RRP1P35178 CDC33YOL139C 642 nt2.03□□□□□ -2.08
RRP1P35178 PUT3YKL015W 2940 nt2.03□□□□□ -2.08
RRP1P35178 VPS35YJL154C 2835 nt2.03□□□□□ -2.09
RRP1P35178 ATG9YDL149W 2994 nt2.02□□□□□ -2.09
RRP1P35178 MNE1YOR350C 1992 nt2.02□□□□□ -2.09
RRP1P35178 EMP24YGL200C 612 nt2.02□□□□□ -2.09
RRP1P35178 ECL1YGR146C 636 nt2.02□□□□□ -2.09
RRP1P35178 YMR324CYMR324C 243 nt2.02□□□□□ -2.09
RRP1P35178 YPR177CYPR177C 372 nt2.02□□□□□ -2.09
RRP1P35178 VPS34YLR240W 2628 nt2.02□□□□□ -2.09
RRP1P35178 GDS1YOR355W 1569 nt2.02□□□□□ -2.09
RRP1P35178 MMS22YLR320W 4365 nt2.01□□□□□ -2.09
RRP1P35178 VPS52YDR484W 1926 nt2.01□□□□□ -2.09
RRP1P35178 YBR012W-AYBR012W-A 1323 nt2.01□□□□□ -2.09
RRP1P35178 YOR142W-AYOR142W-A 1323 nt2.01□□□□□ -2.09
RRP1P35178 YPR158W-AYPR158W-A 1323 nt2.01□□□□□ -2.09
RRP1P35178 YHR125WYHR125W 306 nt2.01□□□□□ -2.09
RRP1P35178 TIF11YMR260C 462 nt2.01□□□□□ -2.09
RRP1P35178 CMC2YBL059C-A 330 nt2.01□□□□□ -2.09
RRP1P35178 SLM6YBR266C 453 nt2.01□□□□□ -2.09
RRP1P35178 NIC96YFR002W 2520 nt2.01□□□□□ -2.09
RRP1P35178 STB4YMR019W 2850 nt2.01□□□□□ -2.09
RRP1P35178 PPN1YDR452W 2025 nt2.01□□□□□ -2.09
RRP1P35178 TBS1YBR150C 3285 nt2□□□□□ -2.09
RRP1P35178 VPH1YOR270C 2523 nt2□□□□□ -2.09
RRP1P35178 YJL016WYJL016W 1686 nt2□□□□□ -2.09
RRP1P35178 GYP5YPL249C 2685 nt2□□□□□ -2.09
RRP1P35178 YMR045CYMR045C 5268 nt2□□□□□ -2.09
RRP1P35178 VOA1YGR106C 798 nt2□□□□□ -2.09
RRP1P35178 YLR101CYLR101C 396 nt2□□□□□ -2.09
RRP1P35178 EGD1YPL037C 474 nt2□□□□□ -2.09
RRP1P35178 YPR039WYPR039W 336 nt2□□□□□ -2.09
RRP1P35178 snR54snR54 86 nt2□□□□□ -2.09
RRP1P35178 TRL1YJL087C 2484 nt2□□□□□ -2.09
RRP1P35178 HMLALPHA2YCL067C 633 nt1.99□□□□□ -2.09
RRP1P35178 MATALPHA2YCR039C 633 nt1.99□□□□□ -2.09
RRP1P35178 YDL041WYDL041W 354 nt1.99□□□□□ -2.09
RRP1P35178 YGR025WYGR025W 303 nt1.99□□□□□ -2.09
RRP1P35178 YGR042WYGR042W 816 nt1.99□□□□□ -2.09
RRP1P35178 NBL1YHR199C-A 222 nt1.99□□□□□ -2.09
RRP1P35178 CRG1YHR209W 876 nt1.99□□□□□ -2.09
RRP1P35178 YLR264C-AYLR264C-A 117 nt1.99□□□□□ -2.09
RRP1P35178 YMR153C-AYMR153C-A 336 nt1.99□□□□□ -2.09
RRP1P35178 TSC3YBR058C-A 243 nt1.99□□□□□ -2.09
RRP1P35178 UTP21YLR409C 2820 nt1.99□□□□□ -2.09
RRP1P35178 IRC10YOL015W 1761 nt1.98□□□□□ -2.09
RRP1P35178 CFT2YLR115W 2580 nt1.98□□□□□ -2.09
RRP1P35178 CDC50YCR094W 1176 nt1.98□□□□□ -2.09
RRP1P35178 MZM1YDR493W 372 nt1.98□□□□□ -2.09
RRP1P35178 HUR1YGL168W 333 nt1.98□□□□□ -2.09
RRP1P35178 YKR075W-AYKR075W-A 270 nt1.98□□□□□ -2.09
RRP1P35178 PDR8YLR266C 2106 nt1.97□□□□□ -2.09
RRP1P35178 LSO2YGR169C-A 279 nt1.97□□□□□ -2.09
RRP1P35178 RRT1YBL048W 312 nt1.97□□□□□ -2.09
RRP1P35178 snR13snR13 124 nt1.97□□□□□ -2.09
RRP1P35178 RTC6YPL183W-A 282 nt1.97□□□□□ -2.09
RRP1P35178 PRM3YPL192C 402 nt1.97□□□□□ -2.09
RRP1P35178 SSQ1YLR369W 1974 nt1.97□□□□□ -2.09
RRP1P35178 CDC60YPL160W 3273 nt1.97□□□□□ -2.09
RRP1P35178 SPC72YAL047C 1869 nt1.97□□□□□ -2.09
RRP1P35178 RTT101YJL047C 2529 nt1.96□□□□□ -2.09
RRP1P35178 CHC1YGL206C 4962 nt1.96□□□□□ -2.1
RRP1P35178 CAJ1YER048C 1176 nt1.96□□□□□ -2.1
RRP1P35178 snR79snR79 84 nt1.95□□□□□ -2.1
RRP1P35178 YER006C-AYER006C-A 318 nt1.95□□□□□ -2.1
RRP1P35178 YER068C-AYER068C-A 432 nt1.95□□□□□ -2.1
RRP1P35178 YHR214W-AYHR214W-A 486 nt1.95□□□□□ -2.1
RRP1P35178 YKL202WYKL202W 582 nt1.95□□□□□ -2.1
RRP1P35178 LCL2YLR104W 396 nt1.95□□□□□ -2.1
RRP1P35178 YAR068WYAR068W 486 nt1.95□□□□□ -2.1
RRP1P35178 YNL010WYNL010W 726 nt1.95□□□□□ -2.1
RRP1P35178 YNL324WYNL324W 396 nt1.95□□□□□ -2.1
RRP1P35178 YOR394C-AYOR394C-A 168 nt1.95□□□□□ -2.1
RRP1P35178 VMR1YHL035C 4779 nt1.94□□□□□ -2.1
RRP1P35178 YHR214C-BYHR214C-B 5382 nt1.94□□□□□ -2.1
RRP1P35178 IRC20YLR247C 4671 nt1.94□□□□□ -2.1
RRP1P35178 DAD4YDR320C-A 219 nt1.94□□□□□ -2.1
RRP1P35178 RPL37BYDR500C 267 nt1.94□□□□□ -2.1
RRP1P35178 tT(UGU)HtT(UGU)H 72 nt1.94□□□□□ -2.1
RRP1P35178 YHR210CYHR210C 1026 nt1.94□□□□□ -2.1
RRP1P35178 HSK3YKL138C-A 210 nt1.94□□□□□ -2.1
RRP1P35178 YLR406C-AYLR406C-A 150 nt1.94□□□□□ -2.1
RRP1P35178 YOR192C-CYOR192C-C 237 nt1.94□□□□□ -2.1
RRP1P35178 YBR032WYBR032W 303 nt1.94□□□□□ -2.1
RRP1P35178 YCL023CYCL023C 348 nt1.94□□□□□ -2.1
RRP1P35178 IRA1YBR140C 9279 nt1.94□□□□□ -2.1
RRP1P35178 YDR114CYDR114C 303 nt1.93□□□□□ -2.1
RRP1P35178 YER135CYER135C 393 nt1.93□□□□□ -2.1
RRP1P35178 YFL019CYFL019C 354 nt1.93□□□□□ -2.1
RRP1P35178 SEC22YLR268W 645 nt1.93□□□□□ -2.1
RRP1P35178 YMR247W-AYMR247W-A 144 nt1.93□□□□□ -2.1
RRP1P35178 UBP1YDL122W 2430 nt1.93□□□□□ -2.1
RRP1P35178 COX1Q0045 1605 nt1.92□□□□□ -2.1
RRP1P35178 NFU1YKL040C 771 nt1.92□□□□□ -2.1
RRP1P35178 MYO2YOR326W 4725 nt1.92□□□□□ -2.1
RRP1P35178 PLC1YPL268W 2610 nt1.92□□□□□ -2.1
RRP1P35178 KAR3YPR141C 2190 nt1.92□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 79.6 ms