Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CKS2P33552 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CKS2P33552 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CKS2P33552 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CKS2P33552 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CKS2P33552 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CKS2P33552 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CKS2P33552 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CKS2P33552 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CKS2P33552 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CKS2P33552 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.93□□□□□ -0.02
CKS2P33552 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.93□□□□□ -0.02
CKS2P33552 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.93□□□□□ -0.02
CKS2P33552 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.93□□□□□ -0.02
CKS2P33552 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CKS2P33552 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CKS2P33552 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CKS2P33552 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CKS2P33552 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CKS2P33552 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CKS2P33552 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CKS2P33552 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CKS2P33552 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.93□□□□□ -0.02
CKS2P33552 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS2P33552 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS2P33552 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS2P33552 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS2P33552 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.92□□□□□ -0.02
CKS2P33552 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS2P33552 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
CKS2P33552 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CKS2P33552 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS2P33552 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CKS2P33552 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CKS2P33552 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS2P33552 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS2P33552 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS2P33552 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CKS2P33552 AL158211.5-201ENST00000623583 2518 ntBASIC14.92□□□□□ -0.02
CKS2P33552 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CKS2P33552 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC14.92□□□□□ -0.02
CKS2P33552 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS2P33552 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.92□□□□□ -0.02
CKS2P33552 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.92□□□□□ -0.02
CKS2P33552 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS2P33552 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS2P33552 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS2P33552 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.92□□□□□ -0.02
CKS2P33552 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.92□□□□□ -0.02
CKS2P33552 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.92□□□□□ -0.02
CKS2P33552 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CKS2P33552 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS2P33552 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CKS2P33552 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CKS2P33552 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CKS2P33552 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CKS2P33552 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.91□□□□□ -0.02
CKS2P33552 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CKS2P33552 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.91□□□□□ -0.02
CKS2P33552 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CKS2P33552 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CKS2P33552 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.91□□□□□ -0.02
CKS2P33552 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CKS2P33552 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CKS2P33552 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKS2P33552 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CKS2P33552 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CKS2P33552 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CKS2P33552 OR6D1P-202ENST00000641007 5290 ntBASIC14.9□□□□□ -0.02
CKS2P33552 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.9□□□□□ -0.02
CKS2P33552 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.9□□□□□ -0.02
CKS2P33552 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CKS2P33552 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS2P33552 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.9□□□□□ -0.02
CKS2P33552 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS2P33552 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS2P33552 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS2P33552 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS2P33552 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.9□□□□□ -0.02
CKS2P33552 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS2P33552 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.9□□□□□ -0.02
CKS2P33552 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms