Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
VARSP26640 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VARSP26640 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VARSP26640 AC011767.1-201ENST00000617410 1153 ntBASIC19.91■□□□□ 0.78
VARSP26640 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.91■□□□□ 0.78
VARSP26640 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VARSP26640 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VARSP26640 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VARSP26640 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.91■□□□□ 0.78
VARSP26640 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VARSP26640 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VARSP26640 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VARSP26640 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
VARSP26640 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
VARSP26640 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VARSP26640 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VARSP26640 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VARSP26640 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.9■□□□□ 0.78
VARSP26640 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
VARSP26640 CROCCP5-201ENST00000436658 830 ntBASIC19.9■□□□□ 0.78
VARSP26640 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.9■□□□□ 0.78
VARSP26640 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.9■□□□□ 0.78
VARSP26640 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.9■□□□□ 0.78
VARSP26640 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.9■□□□□ 0.78
VARSP26640 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
VARSP26640 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VARSP26640 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
VARSP26640 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VARSP26640 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VARSP26640 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VARSP26640 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
VARSP26640 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VARSP26640 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
VARSP26640 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.89■□□□□ 0.78
VARSP26640 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VARSP26640 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VARSP26640 AC091799.1-201ENST00000422823 811 ntBASIC19.89■□□□□ 0.77
VARSP26640 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.89■□□□□ 0.77
VARSP26640 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.89■□□□□ 0.77
VARSP26640 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
VARSP26640 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VARSP26640 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
VARSP26640 AC243732.1-201ENST00000612648 864 ntBASIC19.89■□□□□ 0.77
VARSP26640 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.89■□□□□ 0.77
VARSP26640 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.89■□□□□ 0.77
VARSP26640 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VARSP26640 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VARSP26640 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VARSP26640 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.88■□□□□ 0.77
VARSP26640 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.88■□□□□ 0.77
VARSP26640 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
VARSP26640 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.88■□□□□ 0.77
VARSP26640 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VARSP26640 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.88■□□□□ 0.77
VARSP26640 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VARSP26640 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VARSP26640 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.88■□□□□ 0.77
VARSP26640 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.88■□□□□ 0.77
VARSP26640 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VARSP26640 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.88■□□□□ 0.77
VARSP26640 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.88■□□□□ 0.77
VARSP26640 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.88■□□□□ 0.77
VARSP26640 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
VARSP26640 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VARSP26640 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VARSP26640 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VARSP26640 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VARSP26640 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
VARSP26640 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VARSP26640 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VARSP26640 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARSP26640 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARSP26640 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARSP26640 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VARSP26640 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
VARSP26640 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARSP26640 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
VARSP26640 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
VARSP26640 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
VARSP26640 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
VARSP26640 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARSP26640 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.87■□□□□ 0.77
VARSP26640 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
VARSP26640 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VARSP26640 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARSP26640 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.87■□□□□ 0.77
VARSP26640 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.87■□□□□ 0.77
VARSP26640 CD99P1-205ENST00000527459 561 ntBASIC19.87■□□□□ 0.77
VARSP26640 AC010536.3-201ENST00000620306 533 ntBASIC19.87■□□□□ 0.77
VARSP26640 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARSP26640 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARSP26640 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VARSP26640 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
VARSP26640 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VARSP26640 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
VARSP26640 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
VARSP26640 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.86■□□□□ 0.77
VARSP26640 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.86■□□□□ 0.77
VARSP26640 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VARSP26640 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms