Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
MMP8P22894 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.42■■□□□ 1.02
MMP8P22894 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MMP8P22894 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MMP8P22894 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
MMP8P22894 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.42■■□□□ 1.02
MMP8P22894 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.42■■□□□ 1.02
MMP8P22894 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.42■■□□□ 1.02
MMP8P22894 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MMP8P22894 CDCA4P2-201ENST00000441182 718 ntBASIC21.42■■□□□ 1.02
MMP8P22894 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MMP8P22894 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MMP8P22894 AC005181.1-201ENST00000604782 1256 ntBASIC21.42■■□□□ 1.02
MMP8P22894 OR10C1-204ENST00000622521 1039 ntBASIC21.42■■□□□ 1.02
MMP8P22894 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
MMP8P22894 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
MMP8P22894 SMG8-203ENST00000578922 2178 ntBASIC21.41■■□□□ 1.02
MMP8P22894 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
MMP8P22894 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MMP8P22894 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MMP8P22894 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MMP8P22894 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
MMP8P22894 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.41■■□□□ 1.02
MMP8P22894 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.41■■□□□ 1.02
MMP8P22894 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.41■■□□□ 1.02
MMP8P22894 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.41■■□□□ 1.02
MMP8P22894 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.41■■□□□ 1.02
MMP8P22894 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
MMP8P22894 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.41■■□□□ 1.02
MMP8P22894 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.41■■□□□ 1.02
MMP8P22894 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MMP8P22894 AC099778.1-201ENST00000568593 1911 ntBASIC21.41■■□□□ 1.02
MMP8P22894 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MMP8P22894 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.41■■□□□ 1.02
MMP8P22894 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.4■■□□□ 1.02
MMP8P22894 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.4■■□□□ 1.02
MMP8P22894 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MMP8P22894 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
MMP8P22894 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.4■■□□□ 1.02
MMP8P22894 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.4■■□□□ 1.02
MMP8P22894 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.4■■□□□ 1.02
MMP8P22894 RAP2CP1-201ENST00000605103 478 ntBASIC21.4■■□□□ 1.02
MMP8P22894 AC008694.1-202ENST00000636953 945 ntBASIC21.4■■□□□ 1.02
MMP8P22894 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
MMP8P22894 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
MMP8P22894 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MMP8P22894 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.4■■□□□ 1.02
MMP8P22894 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MMP8P22894 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.4■■□□□ 1.02
MMP8P22894 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.4■■□□□ 1.02
MMP8P22894 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
MMP8P22894 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
MMP8P22894 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.39■■□□□ 1.02
MMP8P22894 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
MMP8P22894 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MMP8P22894 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MMP8P22894 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
MMP8P22894 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.39■■□□□ 1.01
MMP8P22894 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.39■■□□□ 1.01
MMP8P22894 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.39■■□□□ 1.01
MMP8P22894 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
MMP8P22894 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.39■■□□□ 1.01
MMP8P22894 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MMP8P22894 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MMP8P22894 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MMP8P22894 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.38■■□□□ 1.01
MMP8P22894 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP8P22894 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP8P22894 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MMP8P22894 DPP3P2-201ENST00000416030 1696 ntBASIC21.38■■□□□ 1.01
MMP8P22894 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.38■■□□□ 1.01
MMP8P22894 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP8P22894 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.38■■□□□ 1.01
MMP8P22894 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP8P22894 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.38■■□□□ 1.01
MMP8P22894 AL512625.2-201ENST00000417533 625 ntBASIC21.38■■□□□ 1.01
MMP8P22894 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.38■■□□□ 1.01
MMP8P22894 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.38■■□□□ 1.01
MMP8P22894 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.38■■□□□ 1.01
MMP8P22894 CYP2T3P-201ENST00000601990 817 ntBASIC21.38■■□□□ 1.01
MMP8P22894 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MMP8P22894 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.38■■□□□ 1.01
MMP8P22894 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP8P22894 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.38■■□□□ 1.01
MMP8P22894 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP8P22894 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.38■■□□□ 1.01
MMP8P22894 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MMP8P22894 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP8P22894 AC010980.2-201ENST00000587099 1412 ntBASIC21.38■■□□□ 1.01
MMP8P22894 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
MMP8P22894 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP8P22894 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.37■■□□□ 1.01
MMP8P22894 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP8P22894 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP8P22894 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
MMP8P22894 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP8P22894 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP8P22894 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MMP8P22894 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.37■■□□□ 1.01
MMP8P22894 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms