Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-EP13747 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-EP13747 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-EP13747 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-EP13747 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-EP13747 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-EP13747 POM121L13P-201ENST00000422362 380 ntBASIC20.59■□□□□ 0.89
HLA-EP13747 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.59■□□□□ 0.89
HLA-EP13747 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.59■□□□□ 0.89
HLA-EP13747 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.59■□□□□ 0.89
HLA-EP13747 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.59■□□□□ 0.89
HLA-EP13747 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-EP13747 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-EP13747 FAM197Y4-202ENST00000622692 608 ntBASIC20.59■□□□□ 0.89
HLA-EP13747 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-EP13747 AC027702.1-201ENST00000563810 1770 ntBASIC20.59■□□□□ 0.89
HLA-EP13747 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-EP13747 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
HLA-EP13747 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-EP13747 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-EP13747 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-EP13747 AF106564.1-201ENST00000607058 2553 ntBASIC20.58■□□□□ 0.89
HLA-EP13747 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-EP13747 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
HLA-EP13747 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-EP13747 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
HLA-EP13747 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-EP13747 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.58■□□□□ 0.89
HLA-EP13747 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-EP13747 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-EP13747 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.58■□□□□ 0.89
HLA-EP13747 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-EP13747 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.58■□□□□ 0.89
HLA-EP13747 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.58■□□□□ 0.89
HLA-EP13747 RN7SL471P-201ENST00000580476 299 ntBASIC20.58■□□□□ 0.89
HLA-EP13747 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.58■□□□□ 0.89
HLA-EP13747 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-EP13747 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.58■□□□□ 0.88
HLA-EP13747 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-EP13747 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-EP13747 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-EP13747 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.58■□□□□ 0.88
HLA-EP13747 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-EP13747 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-EP13747 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-EP13747 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-EP13747 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-EP13747 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.57■□□□□ 0.88
HLA-EP13747 RPS2P4-201ENST00000476944 856 ntBASIC20.57■□□□□ 0.88
HLA-EP13747 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.57■□□□□ 0.88
HLA-EP13747 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-EP13747 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.57■□□□□ 0.88
HLA-EP13747 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-EP13747 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.57■□□□□ 0.88
HLA-EP13747 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-EP13747 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.57■□□□□ 0.88
HLA-EP13747 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.57■□□□□ 0.88
HLA-EP13747 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-EP13747 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-EP13747 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-EP13747 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-EP13747 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-EP13747 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.56■□□□□ 0.88
HLA-EP13747 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
HLA-EP13747 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-EP13747 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-EP13747 AC121338.2-201ENST00000622535 1744 ntBASIC20.56■□□□□ 0.88
HLA-EP13747 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-EP13747 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-EP13747 FEM1AP4-201ENST00000443167 1987 ntBASIC20.56■□□□□ 0.88
HLA-EP13747 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-EP13747 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-EP13747 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-EP13747 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-EP13747 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-EP13747 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-EP13747 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-EP13747 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-EP13747 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-EP13747 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.56■□□□□ 0.88
HLA-EP13747 AC005829.2-201ENST00000571422 1056 ntBASIC20.56■□□□□ 0.88
HLA-EP13747 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-EP13747 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-EP13747 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-EP13747 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HLA-EP13747 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HLA-EP13747 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-EP13747 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-EP13747 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-EP13747 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-EP13747 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-EP13747 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-EP13747 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.55■□□□□ 0.88
HLA-EP13747 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.55■□□□□ 0.88
HLA-EP13747 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-EP13747 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-EP13747 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.55■□□□□ 0.88
HLA-EP13747 AL596275.1-201ENST00000423464 877 ntBASIC20.55■□□□□ 0.88
HLA-EP13747 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-EP13747 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms