Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
RARAP10276 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
RARAP10276 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.33■■□□□ 1
RARAP10276 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RARAP10276 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.33■■□□□ 1
RARAP10276 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RARAP10276 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
RARAP10276 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.32■■□□□ 1
RARAP10276 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.32■■□□□ 1
RARAP10276 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RARAP10276 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
RARAP10276 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RARAP10276 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RARAP10276 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.32■■□□□ 1
RARAP10276 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.32■■□□□ 1
RARAP10276 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RARAP10276 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
RARAP10276 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RARAP10276 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
RARAP10276 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.32■■□□□ 1
RARAP10276 MIR2861-201ENST00000636310 90 ntBASIC21.32■■□□□ 1
RARAP10276 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.32■■□□□ 1
RARAP10276 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.32■■□□□ 1
RARAP10276 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.32■■□□□ 1
RARAP10276 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RARAP10276 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RARAP10276 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
RARAP10276 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RARAP10276 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.32■■□□□ 1
RARAP10276 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RARAP10276 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.32■■□□□ 1
RARAP10276 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RARAP10276 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RARAP10276 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.31■■□□□ 1
RARAP10276 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RARAP10276 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.31■■□□□ 1
RARAP10276 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RARAP10276 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RARAP10276 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.31■■□□□ 1
RARAP10276 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.31■■□□□ 1
RARAP10276 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RARAP10276 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.31■■□□□ 1
RARAP10276 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RARAP10276 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RARAP10276 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RARAP10276 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.3■■□□□ 1
RARAP10276 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.3■■□□□ 1
RARAP10276 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
RARAP10276 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.3■■□□□ 1
RARAP10276 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.3■■□□□ 1
RARAP10276 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.3■■□□□ 1
RARAP10276 MFSD11-216ENST00000590393 1141 ntBASIC21.3■■□□□ 1
RARAP10276 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RARAP10276 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RARAP10276 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.3■■□□□ 1
RARAP10276 AC092720.2-201ENST00000602388 1665 ntBASIC21.3■■□□□ 1
RARAP10276 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
RARAP10276 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RARAP10276 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RARAP10276 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RARAP10276 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RARAP10276 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RARAP10276 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
RARAP10276 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RARAP10276 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.29■■□□□ 1
RARAP10276 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.29■■□□□ 1
RARAP10276 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.29■■□□□ 1
RARAP10276 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RARAP10276 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RARAP10276 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.29■■□□□ 1
RARAP10276 AC016769.1-201ENST00000409132 1010 ntBASIC21.29■■□□□ 1
RARAP10276 AC006015.1-201ENST00000429970 570 ntBASIC21.29■■□□□ 1
RARAP10276 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.29■■□□□ 1
RARAP10276 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.29■■□□□ 1
RARAP10276 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
RARAP10276 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RARAP10276 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.29■■□□□ 1
RARAP10276 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.29■■□□□ 1
RARAP10276 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.28■■□□□ 1
RARAP10276 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.28■■□□□ 1
RARAP10276 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RARAP10276 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.28■■□□□ 1
RARAP10276 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
RARAP10276 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RARAP10276 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RARAP10276 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.28■■□□□ 1
RARAP10276 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.28■■□□□ 1
RARAP10276 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.28■■□□□ 1
RARAP10276 CDV3P1-201ENST00000471403 739 ntBASIC21.28■■□□□ 1
RARAP10276 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.28■■□□□ 1
RARAP10276 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.28■■□□□ 1
RARAP10276 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RARAP10276 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RARAP10276 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.28■■□□□ 1
RARAP10276 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RARAP10276 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.28■■□□□ 1
RARAP10276 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
RARAP10276 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RARAP10276 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RARAP10276 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms