Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 USE1YGL098W 738 nt3.08□□□□□ -1.92
TY1A-ER1P0CX71 RPS21AYKR057W 264 nt3.08□□□□□ -1.92
TY1A-ER1P0CX71 GIS2YNL255C 462 nt3.08□□□□□ -1.92
TY1A-ER1P0CX71 SNC2YOR327C 348 nt3.08□□□□□ -1.92
TY1A-ER1P0CX71 YOR333CYOR333C 417 nt3.08□□□□□ -1.92
TY1A-ER1P0CX71 ROG1YGL144C 2058 nt3.08□□□□□ -1.92
TY1A-ER1P0CX71 TAF2YCR042C 4224 nt3.08□□□□□ -1.92
TY1A-ER1P0CX71 KEL2YGR238C 2649 nt3.07□□□□□ -1.92
TY1A-ER1P0CX71 YMR317WYMR317W 3423 nt3.07□□□□□ -1.92
TY1A-ER1P0CX71 ATG26YLR189C 3597 nt3.07□□□□□ -1.92
TY1A-ER1P0CX71 MRP10YDL045W-A 288 nt3.07□□□□□ -1.92
TY1A-ER1P0CX71 MTC3YGL226W 372 nt3.07□□□□□ -1.92
TY1A-ER1P0CX71 YPR089WYPR089W 2667 nt3.07□□□□□ -1.92
TY1A-ER1P0CX71 SEC5YDR166C 2916 nt3.07□□□□□ -1.92
TY1A-ER1P0CX71 PHO2YDL106C 1680 nt3.06□□□□□ -1.92
TY1A-ER1P0CX71 YDL242WYDL242W 354 nt3.06□□□□□ -1.92
TY1A-ER1P0CX71 YDR286CYDR286C 345 nt3.06□□□□□ -1.92
TY1A-ER1P0CX71 DNL4YOR005C 2835 nt3.06□□□□□ -1.92
TY1A-ER1P0CX71 RPN1YHR027C 2982 nt3.06□□□□□ -1.92
TY1A-ER1P0CX71 RCY1YJL204C 2523 nt3.05□□□□□ -1.92
TY1A-ER1P0CX71 SQS1YNL224C 2304 nt3.05□□□□□ -1.92
TY1A-ER1P0CX71 DBP7YKR024C 2229 nt3.05□□□□□ -1.92
TY1A-ER1P0CX71 VPS35YJL154C 2835 nt3.05□□□□□ -1.92
TY1A-ER1P0CX71 PSK1YAL017W 4071 nt3.05□□□□□ -1.92
TY1A-ER1P0CX71 YBL083CYBL083C 426 nt3.05□□□□□ -1.92
TY1A-ER1P0CX71 YBR182C-AYBR182C-A 195 nt3.05□□□□□ -1.92
TY1A-ER1P0CX71 snR48snR48 113 nt3.05□□□□□ -1.92
TY1A-ER1P0CX71 MDM20YOL076W 2391 nt3.05□□□□□ -1.92
TY1A-ER1P0CX71 TFC1YBR123C 1950 nt3.05□□□□□ -1.92
TY1A-ER1P0CX71 SPT21YMR179W 2277 nt3.04□□□□□ -1.92
TY1A-ER1P0CX71 SNF5YBR289W 2718 nt3.04□□□□□ -1.92
TY1A-ER1P0CX71 tX(XXX)DtX(XXX)D 100 nt3.04□□□□□ -1.92
TY1A-ER1P0CX71 YBL065WYBL065W 345 nt3.04□□□□□ -1.92
TY1A-ER1P0CX71 YOR376WYOR376W 369 nt3.04□□□□□ -1.92
TY1A-ER1P0CX71 YPR092WYPR092W 306 nt3.04□□□□□ -1.92
TY1A-ER1P0CX71 URA2YJL130C 6645 nt3.04□□□□□ -1.92
TY1A-ER1P0CX71 RRP5YMR229C 5190 nt3.03□□□□□ -1.92
TY1A-ER1P0CX71 COF1YLL050C 432 nt3.03□□□□□ -1.92
TY1A-ER1P0CX71 YPR108W-AYPR108W-A 213 nt3.03□□□□□ -1.92
TY1A-ER1P0CX71 SMY1YKL079W 1971 nt3.03□□□□□ -1.92
TY1A-ER1P0CX71 HSC82YMR186W 2118 nt3.02□□□□□ -1.93
TY1A-ER1P0CX71 SPC105YGL093W 2754 nt3.02□□□□□ -1.93
TY1A-ER1P0CX71 DSE4YNR067C 3354 nt3.02□□□□□ -1.93
TY1A-ER1P0CX71 RPS8AYBL072C 603 nt3.02□□□□□ -1.93
TY1A-ER1P0CX71 PLC1YPL268W 2610 nt3.02□□□□□ -1.93
TY1A-ER1P0CX71 PRP6YBR055C 2700 nt3.01□□□□□ -1.93
TY1A-ER1P0CX71 YBR184WYBR184W 1572 nt3.01□□□□□ -1.93
TY1A-ER1P0CX71 SMD1YGR074W 441 nt3.01□□□□□ -1.93
TY1A-ER1P0CX71 INA22YIR024C 651 nt3.01□□□□□ -1.93
TY1A-ER1P0CX71 LRE1YCL051W 1752 nt3.01□□□□□ -1.93
TY1A-ER1P0CX71 SEF1YBL066C 3447 nt3.01□□□□□ -1.93
TY1A-ER1P0CX71 VPS54YDR027C 2670 nt3□□□□□ -1.93
TY1A-ER1P0CX71 SSQ1YLR369W 1974 nt3□□□□□ -1.93
TY1A-ER1P0CX71 VPS34YLR240W 2628 nt3□□□□□ -1.93
TY1A-ER1P0CX71 FMP16YDR070C 282 nt3□□□□□ -1.93
TY1A-ER1P0CX71 YGL217CYGL217C 342 nt3□□□□□ -1.93
TY1A-ER1P0CX71 YLR146W-AYLR146W-A 189 nt3□□□□□ -1.93
TY1A-ER1P0CX71 YPL278CYPL278C 303 nt3□□□□□ -1.93
TY1A-ER1P0CX71 snR52snR52 92 nt3□□□□□ -1.93
TY1A-ER1P0CX71 RSN1YMR266W 2862 nt3□□□□□ -1.93
TY1A-ER1P0CX71 GRR1YJR090C 3456 nt2.99□□□□□ -1.93
TY1A-ER1P0CX71 RAD2YGR258C 3096 nt2.99□□□□□ -1.93
TY1A-ER1P0CX71 CSR2YPR030W 3366 nt2.99□□□□□ -1.93
TY1A-ER1P0CX71 INP2YMR163C 2118 nt2.99□□□□□ -1.93
TY1A-ER1P0CX71 POL2YNL262W 6669 nt2.99□□□□□ -1.93
TY1A-ER1P0CX71 RRP12YPL012W 3687 nt2.99□□□□□ -1.93
TY1A-ER1P0CX71 NOP53YPL146C 1368 nt2.99□□□□□ -1.93
TY1A-ER1P0CX71 YLR149CYLR149C 2193 nt2.98□□□□□ -1.93
TY1A-ER1P0CX71 KAP123YER110C 3342 nt2.98□□□□□ -1.93
TY1A-ER1P0CX71 VTC1YER072W 390 nt2.98□□□□□ -1.93
TY1A-ER1P0CX71 YIR030W-AYIR030W-A 384 nt2.98□□□□□ -1.93
TY1A-ER1P0CX71 RTT10YPL183C 3042 nt2.98□□□□□ -1.93
TY1A-ER1P0CX71 MUK1YPL070W 1839 nt2.98□□□□□ -1.93
TY1A-ER1P0CX71 RGR1YLR071C 3249 nt2.97□□□□□ -1.93
TY1A-ER1P0CX71 COX14YML129C 213 nt2.97□□□□□ -1.93
TY1A-ER1P0CX71 RPS12YOR369C 432 nt2.97□□□□□ -1.93
TY1A-ER1P0CX71 snR46snR46 197 nt2.97□□□□□ -1.93
TY1A-ER1P0CX71 SWI6YLR182W 2412 nt2.97□□□□□ -1.93
TY1A-ER1P0CX71 YOR381W-AYOR381W-A 168 nt2.96□□□□□ -1.94
TY1A-ER1P0CX71 MGR2YPL098C 342 nt2.96□□□□□ -1.94
TY1A-ER1P0CX71 RIC1YLR039C 3171 nt2.96□□□□□ -1.94
TY1A-ER1P0CX71 YDR186CYDR186C 2634 nt2.96□□□□□ -1.94
TY1A-ER1P0CX71 HRD3YLR207W 2502 nt2.95□□□□□ -1.94
TY1A-ER1P0CX71 YBR225WYBR225W 2703 nt2.95□□□□□ -1.94
TY1A-ER1P0CX71 YHR080CYHR080C 4038 nt2.95□□□□□ -1.94
TY1A-ER1P0CX71 YLR154C-HYLR154C-H 132 nt2.95□□□□□ -1.94
TY1A-ER1P0CX71 YLR156C-AYLR156C-A 132 nt2.95□□□□□ -1.94
TY1A-ER1P0CX71 YLR157C-CYLR157C-C 132 nt2.95□□□□□ -1.94
TY1A-ER1P0CX71 YLR159C-AYLR159C-A 132 nt2.95□□□□□ -1.94
TY1A-ER1P0CX71 NET1YJL076W 3570 nt2.95□□□□□ -1.94
TY1A-ER1P0CX71 PEP3YLR148W 2757 nt2.95□□□□□ -1.94
TY1A-ER1P0CX71 SUL1YBR294W 2580 nt2.94□□□□□ -1.94
TY1A-ER1P0CX71 VAS1YGR094W 3315 nt2.94□□□□□ -1.94
TY1A-ER1P0CX71 YNL097C-BYNL097C-B 123 nt2.94□□□□□ -1.94
TY1A-ER1P0CX71 snR43snR43 209 nt2.94□□□□□ -1.94
TY1A-ER1P0CX71 RDS1YCR106W 2499 nt2.94□□□□□ -1.94
TY1A-ER1P0CX71 AUS1YOR011W 4185 nt2.93□□□□□ -1.94
TY1A-ER1P0CX71 DPH6YLR143W 2058 nt2.93□□□□□ -1.94
TY1A-ER1P0CX71 ULI1YFR026C 510 nt2.93□□□□□ -1.94
TY1A-ER1P0CX71 APC9YLR102C 798 nt2.93□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 65.7 ms