Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CD48P09326 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.08■□□□□ 0.97
CD48P09326 AL162412.1-201ENST00000567129 965 ntBASIC21.08■□□□□ 0.97
CD48P09326 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.08■□□□□ 0.97
CD48P09326 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.08■□□□□ 0.97
CD48P09326 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CD48P09326 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.08■□□□□ 0.97
CD48P09326 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.08■□□□□ 0.96
CD48P09326 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CD48P09326 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CD48P09326 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CD48P09326 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.08■□□□□ 0.96
CD48P09326 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD48P09326 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD48P09326 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CD48P09326 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD48P09326 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CD48P09326 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD48P09326 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.07■□□□□ 0.96
CD48P09326 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
CD48P09326 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD48P09326 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.07■□□□□ 0.96
CD48P09326 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD48P09326 AC004911.1-201ENST00000416316 871 ntBASIC21.07■□□□□ 0.96
CD48P09326 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.07■□□□□ 0.96
CD48P09326 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CD48P09326 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.07■□□□□ 0.96
CD48P09326 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
CD48P09326 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.07■□□□□ 0.96
CD48P09326 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CD48P09326 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
CD48P09326 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD48P09326 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CD48P09326 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.06■□□□□ 0.96
CD48P09326 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.06■□□□□ 0.96
CD48P09326 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.06■□□□□ 0.96
CD48P09326 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CD48P09326 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.06■□□□□ 0.96
CD48P09326 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.06■□□□□ 0.96
CD48P09326 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CD48P09326 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD48P09326 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.06■□□□□ 0.96
CD48P09326 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CD48P09326 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.06■□□□□ 0.96
CD48P09326 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD48P09326 AFG3L1P-217ENST00000557444 2447 ntBASIC21.06■□□□□ 0.96
CD48P09326 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD48P09326 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CD48P09326 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CD48P09326 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.05■□□□□ 0.96
CD48P09326 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.05■□□□□ 0.96
CD48P09326 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD48P09326 AC087633.2-202ENST00000565166 1439 ntBASIC21.05■□□□□ 0.96
CD48P09326 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD48P09326 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD48P09326 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD48P09326 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD48P09326 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.05■□□□□ 0.96
CD48P09326 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD48P09326 CYP2T1P-201ENST00000432607 1285 ntBASIC21.05■□□□□ 0.96
CD48P09326 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD48P09326 RARRES2P4-201ENST00000514074 484 ntBASIC21.05■□□□□ 0.96
CD48P09326 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.05■□□□□ 0.96
CD48P09326 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.05■□□□□ 0.96
CD48P09326 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD48P09326 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD48P09326 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CD48P09326 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CD48P09326 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.05■□□□□ 0.96
CD48P09326 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD48P09326 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD48P09326 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CD48P09326 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD48P09326 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD48P09326 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.04■□□□□ 0.96
CD48P09326 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.04■□□□□ 0.96
CD48P09326 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CD48P09326 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD48P09326 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CD48P09326 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.04■□□□□ 0.96
CD48P09326 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.04■□□□□ 0.96
CD48P09326 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.04■□□□□ 0.96
CD48P09326 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.04■□□□□ 0.96
CD48P09326 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CD48P09326 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.04■□□□□ 0.96
CD48P09326 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD48P09326 AL356652.1-201ENST00000615962 565 ntBASIC21.04■□□□□ 0.96
CD48P09326 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.04■□□□□ 0.96
CD48P09326 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.04■□□□□ 0.96
CD48P09326 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.04■□□□□ 0.96
CD48P09326 DPP3P2-201ENST00000416030 1696 ntBASIC21.04■□□□□ 0.96
CD48P09326 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD48P09326 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.04■□□□□ 0.96
CD48P09326 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CD48P09326 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
CD48P09326 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CD48P09326 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD48P09326 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD48P09326 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CD48P09326 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms