Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 TCF3P1-201ENST00000423021 1937 ntBASIC18.2■□□□□ 0.5
HLA-DPB1P04440 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 AC027612.3-201ENST00000413684 1047 ntBASIC18.2■□□□□ 0.5
HLA-DPB1P04440 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DPB1P04440 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 TPRG1LP1-201ENST00000598702 760 ntBASIC18.19■□□□□ 0.5
HLA-DPB1P04440 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 AC011484.1-201ENST00000377652 1995 ntBASIC18.19■□□□□ 0.5
HLA-DPB1P04440 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DPB1P04440 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 AC116562.4-201ENST00000641316 2276 ntBASIC18.18■□□□□ 0.5
HLA-DPB1P04440 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DPB1P04440 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 AC055733.4-201ENST00000638462 1354 ntBASIC18.17■□□□□ 0.5
HLA-DPB1P04440 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DPB1P04440 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPB1P04440 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPB1P04440 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPB1P04440 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-DPB1P04440 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-DPB1P04440 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPB1P04440 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPB1P04440 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HLA-DPB1P04440 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.16■□□□□ 0.5
HLA-DPB1P04440 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-DPB1P04440 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
HLA-DPB1P04440 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms