Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
HLA-DQA2P01906 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQA2P01906 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.21■□□□□ 0.51
HLA-DQA2P01906 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.21■□□□□ 0.51
HLA-DQA2P01906 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HLA-DQA2P01906 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.2■□□□□ 0.5
HLA-DQA2P01906 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA2P01906 AC092720.2-201ENST00000602388 1665 ntBASIC18.18■□□□□ 0.5
HLA-DQA2P01906 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 AL121603.2-201ENST00000557373 2117 ntBASIC18.18■□□□□ 0.5
HLA-DQA2P01906 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DQA2P01906 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA2P01906 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA2P01906 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DQA2P01906 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA2P01906 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA2P01906 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DQA2P01906 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA2P01906 AC004854.2-201ENST00000608450 1441 ntBASIC18.17■□□□□ 0.5
HLA-DQA2P01906 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA2P01906 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA2P01906 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA2P01906 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DQA2P01906 KRT18P20-201ENST00000548986 1279 ntBASIC18.17■□□□□ 0.5
HLA-DQA2P01906 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA2P01906 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA2P01906 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HLA-DQA2P01906 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DQA2P01906 AL512408.1-201ENST00000569378 2000 ntBASIC18.16■□□□□ 0.5
HLA-DQA2P01906 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms