Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLPTM1O96005 MIR638-201ENST00000385237 100 ntBASIC19.1■□□□□ 0.65
CLPTM1O96005 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.1■□□□□ 0.65
CLPTM1O96005 AC079089.2-201ENST00000531211 1277 ntBASIC19.1■□□□□ 0.65
CLPTM1O96005 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.1■□□□□ 0.65
CLPTM1O96005 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.1■□□□□ 0.65
CLPTM1O96005 AC121338.2-201ENST00000622535 1744 ntBASIC19.1■□□□□ 0.65
CLPTM1O96005 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLPTM1O96005 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLPTM1O96005 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.1■□□□□ 0.65
CLPTM1O96005 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CLPTM1O96005 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLPTM1O96005 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.1■□□□□ 0.65
CLPTM1O96005 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLPTM1O96005 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLPTM1O96005 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.1■□□□□ 0.65
CLPTM1O96005 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLPTM1O96005 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLPTM1O96005 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CLPTM1O96005 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLPTM1O96005 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.09■□□□□ 0.65
CLPTM1O96005 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLPTM1O96005 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.09■□□□□ 0.65
CLPTM1O96005 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.09■□□□□ 0.65
CLPTM1O96005 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.09■□□□□ 0.65
CLPTM1O96005 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLPTM1O96005 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.09■□□□□ 0.65
CLPTM1O96005 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
CLPTM1O96005 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.09■□□□□ 0.65
CLPTM1O96005 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
CLPTM1O96005 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.09■□□□□ 0.65
CLPTM1O96005 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
CLPTM1O96005 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.09■□□□□ 0.65
CLPTM1O96005 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.09■□□□□ 0.65
CLPTM1O96005 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLPTM1O96005 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLPTM1O96005 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLPTM1O96005 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLPTM1O96005 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.09■□□□□ 0.65
CLPTM1O96005 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CLPTM1O96005 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CLPTM1O96005 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.09■□□□□ 0.65
CLPTM1O96005 OR7E47P-201ENST00000546390 1422 ntBASIC19.08■□□□□ 0.65
CLPTM1O96005 AC093503.3-201ENST00000624917 2352 ntBASIC19.08■□□□□ 0.65
CLPTM1O96005 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLPTM1O96005 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
CLPTM1O96005 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.08■□□□□ 0.65
CLPTM1O96005 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.08■□□□□ 0.65
CLPTM1O96005 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLPTM1O96005 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CLPTM1O96005 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLPTM1O96005 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLPTM1O96005 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLPTM1O96005 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLPTM1O96005 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLPTM1O96005 AC125437.2-201ENST00000625180 2167 ntBASIC19.08■□□□□ 0.65
CLPTM1O96005 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CLPTM1O96005 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.08■□□□□ 0.64
CLPTM1O96005 MIR4767-201ENST00000582827 78 ntBASIC19.08■□□□□ 0.64
CLPTM1O96005 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.08■□□□□ 0.64
CLPTM1O96005 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.08■□□□□ 0.64
CLPTM1O96005 AL138724.1-201ENST00000606771 1088 ntBASIC19.08■□□□□ 0.64
CLPTM1O96005 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLPTM1O96005 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLPTM1O96005 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CLPTM1O96005 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLPTM1O96005 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLPTM1O96005 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLPTM1O96005 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLPTM1O96005 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLPTM1O96005 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLPTM1O96005 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLPTM1O96005 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.08■□□□□ 0.64
CLPTM1O96005 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLPTM1O96005 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLPTM1O96005 AC005332.7-201ENST00000614046 2005 ntBASIC19.07■□□□□ 0.64
CLPTM1O96005 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.07■□□□□ 0.64
CLPTM1O96005 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLPTM1O96005 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLPTM1O96005 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLPTM1O96005 AC011298.3-201ENST00000615796 283 ntBASIC19.07■□□□□ 0.64
CLPTM1O96005 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLPTM1O96005 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLPTM1O96005 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLPTM1O96005 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLPTM1O96005 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPTM1O96005 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.06■□□□□ 0.64
CLPTM1O96005 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.06■□□□□ 0.64
CLPTM1O96005 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPTM1O96005 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.06■□□□□ 0.64
CLPTM1O96005 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CLPTM1O96005 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPTM1O96005 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPTM1O96005 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPTM1O96005 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPTM1O96005 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPTM1O96005 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
CLPTM1O96005 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPTM1O96005 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLPTM1O96005 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms