Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VAPBO95292 AL591742.1-201ENST00000604433 565 ntBASIC20.41■□□□□ 0.86
VAPBO95292 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VAPBO95292 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VAPBO95292 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
VAPBO95292 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.41■□□□□ 0.86
VAPBO95292 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VAPBO95292 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VAPBO95292 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VAPBO95292 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
VAPBO95292 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
VAPBO95292 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.4■□□□□ 0.86
VAPBO95292 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VAPBO95292 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
VAPBO95292 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.4■□□□□ 0.86
VAPBO95292 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.4■□□□□ 0.86
VAPBO95292 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.4■□□□□ 0.86
VAPBO95292 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
VAPBO95292 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VAPBO95292 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VAPBO95292 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.4■□□□□ 0.86
VAPBO95292 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VAPBO95292 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.4■□□□□ 0.86
VAPBO95292 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VAPBO95292 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.39■□□□□ 0.86
VAPBO95292 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VAPBO95292 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
VAPBO95292 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
VAPBO95292 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
VAPBO95292 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
VAPBO95292 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.39■□□□□ 0.86
VAPBO95292 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
VAPBO95292 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.86
VAPBO95292 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VAPBO95292 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VAPBO95292 AC016769.1-201ENST00000409132 1010 ntBASIC20.39■□□□□ 0.85
VAPBO95292 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
VAPBO95292 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.39■□□□□ 0.85
VAPBO95292 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VAPBO95292 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.39■□□□□ 0.85
VAPBO95292 FAM21FP-204ENST00000608637 956 ntBASIC20.39■□□□□ 0.85
VAPBO95292 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.39■□□□□ 0.85
VAPBO95292 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
VAPBO95292 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.39■□□□□ 0.85
VAPBO95292 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VAPBO95292 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VAPBO95292 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VAPBO95292 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VAPBO95292 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.39■□□□□ 0.85
VAPBO95292 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.38■□□□□ 0.85
VAPBO95292 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
VAPBO95292 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
VAPBO95292 KRT8P36-201ENST00000489121 1440 ntBASIC20.38■□□□□ 0.85
VAPBO95292 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
VAPBO95292 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VAPBO95292 AC099778.1-201ENST00000568593 1911 ntBASIC20.38■□□□□ 0.85
VAPBO95292 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VAPBO95292 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VAPBO95292 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.38■□□□□ 0.85
VAPBO95292 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.38■□□□□ 0.85
VAPBO95292 MFSD11-216ENST00000590393 1141 ntBASIC20.38■□□□□ 0.85
VAPBO95292 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VAPBO95292 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.38■□□□□ 0.85
VAPBO95292 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
VAPBO95292 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.38■□□□□ 0.85
VAPBO95292 AC013268.1-206ENST00000638368 961 ntBASIC20.38■□□□□ 0.85
VAPBO95292 AC112229.1-201ENST00000639295 961 ntBASIC20.38■□□□□ 0.85
VAPBO95292 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.38■□□□□ 0.85
VAPBO95292 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.38■□□□□ 0.85
VAPBO95292 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
VAPBO95292 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.38■□□□□ 0.85
VAPBO95292 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VAPBO95292 SMG8-203ENST00000578922 2178 ntBASIC20.38■□□□□ 0.85
VAPBO95292 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VAPBO95292 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.37■□□□□ 0.85
VAPBO95292 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.37■□□□□ 0.85
VAPBO95292 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
VAPBO95292 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.37■□□□□ 0.85
VAPBO95292 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.37■□□□□ 0.85
VAPBO95292 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.37■□□□□ 0.85
VAPBO95292 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
VAPBO95292 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.37■□□□□ 0.85
VAPBO95292 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.37■□□□□ 0.85
VAPBO95292 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
VAPBO95292 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VAPBO95292 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
VAPBO95292 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VAPBO95292 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.37■□□□□ 0.85
VAPBO95292 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
VAPBO95292 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.36■□□□□ 0.85
VAPBO95292 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAPBO95292 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms