Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
LTN1O94822 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
LTN1O94822 NUDT16P1-203ENST00000513809 620 ntBASIC27.21■■□□□ 1.95
LTN1O94822 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC27.21■■□□□ 1.95
LTN1O94822 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
LTN1O94822 AL121829.2-201ENST00000620908 328 ntBASIC27.21■■□□□ 1.95
LTN1O94822 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
LTN1O94822 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
LTN1O94822 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
LTN1O94822 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
LTN1O94822 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.95
LTN1O94822 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
LTN1O94822 TSPY15P-201ENST00000457163 923 ntBASIC27.2■■□□□ 1.95
LTN1O94822 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC27.2■■□□□ 1.95
LTN1O94822 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.95
LTN1O94822 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC27.2■■□□□ 1.95
LTN1O94822 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
LTN1O94822 LSR-203ENST00000360798 1963 ntTSL 2 BASIC27.2■■□□□ 1.94
LTN1O94822 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
LTN1O94822 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC27.2■■□□□ 1.94
LTN1O94822 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC27.2■■□□□ 1.94
LTN1O94822 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC27.2■■□□□ 1.94
LTN1O94822 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.94
LTN1O94822 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
LTN1O94822 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
LTN1O94822 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
LTN1O94822 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC27.2■■□□□ 1.94
LTN1O94822 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
LTN1O94822 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
LTN1O94822 PTBP1P-201ENST00000554374 1601 ntBASIC27.19■■□□□ 1.94
LTN1O94822 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC27.19■■□□□ 1.94
LTN1O94822 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
LTN1O94822 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
LTN1O94822 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
LTN1O94822 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
LTN1O94822 PRKY-204ENST00000533551 1019 ntBASIC27.19■■□□□ 1.94
LTN1O94822 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
LTN1O94822 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
LTN1O94822 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
LTN1O94822 AC244015.2-201ENST00000616358 1861 ntBASIC27.19■■□□□ 1.94
LTN1O94822 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC27.19■■□□□ 1.94
LTN1O94822 STK25-205ENST00000405883 1904 ntTSL 2 BASIC27.19■■□□□ 1.94
LTN1O94822 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC27.19■■□□□ 1.94
LTN1O94822 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
LTN1O94822 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC27.18■■□□□ 1.94
LTN1O94822 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
LTN1O94822 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
LTN1O94822 KRT8P36-201ENST00000489121 1440 ntBASIC27.18■■□□□ 1.94
LTN1O94822 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
LTN1O94822 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC27.18■■□□□ 1.94
LTN1O94822 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
LTN1O94822 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC27.17■■□□□ 1.94
LTN1O94822 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
LTN1O94822 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
LTN1O94822 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
LTN1O94822 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
LTN1O94822 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
LTN1O94822 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
LTN1O94822 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
LTN1O94822 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC27.17■■□□□ 1.94
LTN1O94822 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
LTN1O94822 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
LTN1O94822 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC27.17■■□□□ 1.94
LTN1O94822 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
LTN1O94822 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
LTN1O94822 AC010331.1-201ENST00000611423 582 ntBASIC27.17■■□□□ 1.94
LTN1O94822 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC27.17■■□□□ 1.94
LTN1O94822 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
LTN1O94822 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC27.17■■□□□ 1.94
LTN1O94822 KRT17P2-201ENST00000300992 1314 ntBASIC27.16■■□□□ 1.94
LTN1O94822 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC27.16■■□□□ 1.94
LTN1O94822 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
LTN1O94822 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
LTN1O94822 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
LTN1O94822 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
LTN1O94822 RCN1P1-201ENST00000400413 996 ntBASIC27.16■■□□□ 1.94
LTN1O94822 AC023632.3-201ENST00000521633 145 ntBASIC27.16■■□□□ 1.94
LTN1O94822 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC27.16■■□□□ 1.94
LTN1O94822 MAX-217ENST00000557277 728 ntTSL 3 BASIC27.16■■□□□ 1.94
LTN1O94822 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC27.16■■□□□ 1.94
LTN1O94822 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
LTN1O94822 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
LTN1O94822 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
LTN1O94822 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
LTN1O94822 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
LTN1O94822 Z98882.1-201ENST00000622160 2253 ntBASIC27.15■■□□□ 1.94
LTN1O94822 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC27.15■■□□□ 1.94
LTN1O94822 AP001412.1-201ENST00000608405 714 ntBASIC27.15■■□□□ 1.94
LTN1O94822 AC011484.1-201ENST00000377652 1995 ntBASIC27.15■■□□□ 1.94
LTN1O94822 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
LTN1O94822 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
LTN1O94822 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC27.14■■□□□ 1.94
LTN1O94822 FAM210CP-201ENST00000445714 574 ntBASIC27.14■■□□□ 1.94
LTN1O94822 KRT16P5-201ENST00000455284 522 ntBASIC27.14■■□□□ 1.94
LTN1O94822 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
LTN1O94822 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC27.14■■□□□ 1.94
LTN1O94822 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
LTN1O94822 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC27.14■■□□□ 1.94
LTN1O94822 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
LTN1O94822 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms