Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CLDN11O75508 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CLDN11O75508 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CLDN11O75508 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN11O75508 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN11O75508 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.79■□□□□ 0.92
CLDN11O75508 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CLDN11O75508 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN11O75508 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CLDN11O75508 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN11O75508 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN11O75508 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN11O75508 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN11O75508 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN11O75508 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDN11O75508 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN11O75508 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
CLDN11O75508 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN11O75508 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN11O75508 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDN11O75508 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDN11O75508 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CLDN11O75508 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDN11O75508 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN11O75508 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN11O75508 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN11O75508 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN11O75508 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN11O75508 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.78■□□□□ 0.92
CLDN11O75508 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.78■□□□□ 0.92
CLDN11O75508 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.78■□□□□ 0.92
CLDN11O75508 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.78■□□□□ 0.92
CLDN11O75508 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
CLDN11O75508 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CLDN11O75508 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN11O75508 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.78■□□□□ 0.92
CLDN11O75508 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN11O75508 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN11O75508 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN11O75508 AC092368.3-202ENST00000574180 1591 ntBASIC20.77■□□□□ 0.92
CLDN11O75508 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN11O75508 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN11O75508 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.77■□□□□ 0.92
CLDN11O75508 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.77■□□□□ 0.92
CLDN11O75508 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.77■□□□□ 0.92
CLDN11O75508 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN11O75508 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CLDN11O75508 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN11O75508 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN11O75508 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN11O75508 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN11O75508 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN11O75508 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN11O75508 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN11O75508 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN11O75508 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.77■□□□□ 0.91
CLDN11O75508 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CLDN11O75508 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN11O75508 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN11O75508 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN11O75508 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CLDN11O75508 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.76■□□□□ 0.91
CLDN11O75508 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CLDN11O75508 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN11O75508 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
CLDN11O75508 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN11O75508 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.76■□□□□ 0.91
CLDN11O75508 UNC93B5-201ENST00000530315 699 ntBASIC20.76■□□□□ 0.91
CLDN11O75508 PNMA6B-201ENST00000538162 1200 ntBASIC20.76■□□□□ 0.91
CLDN11O75508 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CLDN11O75508 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.76■□□□□ 0.91
CLDN11O75508 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN11O75508 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN11O75508 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN11O75508 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN11O75508 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.76■□□□□ 0.91
CLDN11O75508 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN11O75508 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.75■□□□□ 0.91
CLDN11O75508 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN11O75508 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN11O75508 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN11O75508 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN11O75508 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN11O75508 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN11O75508 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN11O75508 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.75■□□□□ 0.91
CLDN11O75508 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN11O75508 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.75■□□□□ 0.91
CLDN11O75508 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN11O75508 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.75■□□□□ 0.91
CLDN11O75508 CLDN5-201ENST00000403084 2357 ntBASIC20.74■□□□□ 0.91
CLDN11O75508 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN11O75508 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN11O75508 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN11O75508 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN11O75508 MIR4651-201ENST00000582622 73 ntBASIC20.74■□□□□ 0.91
CLDN11O75508 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN11O75508 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN11O75508 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CLDN11O75508 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms