Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFS3O75489 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFS3O75489 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFS3O75489 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.25■□□□□ 0.83
NDUFS3O75489 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFS3O75489 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFS3O75489 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.25■□□□□ 0.83
NDUFS3O75489 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFS3O75489 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NDUFS3O75489 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NDUFS3O75489 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.24■□□□□ 0.83
NDUFS3O75489 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.24■□□□□ 0.83
NDUFS3O75489 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 PGM5P4-201ENST00000421970 445 ntBASIC20.24■□□□□ 0.83
NDUFS3O75489 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
NDUFS3O75489 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.24■□□□□ 0.83
NDUFS3O75489 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.24■□□□□ 0.83
NDUFS3O75489 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.24■□□□□ 0.83
NDUFS3O75489 AC231657.2-201ENST00000624556 255 ntBASIC20.24■□□□□ 0.83
NDUFS3O75489 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NDUFS3O75489 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.24■□□□□ 0.83
NDUFS3O75489 KRT8P36-201ENST00000489121 1440 ntBASIC20.24■□□□□ 0.83
NDUFS3O75489 AC068338.2-201ENST00000563278 1430 ntBASIC20.24■□□□□ 0.83
NDUFS3O75489 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.24■□□□□ 0.83
NDUFS3O75489 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NDUFS3O75489 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
NDUFS3O75489 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 AIRN-201ENST00000601203 4374 ntBASIC20.24■□□□□ 0.83
NDUFS3O75489 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS3O75489 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.24■□□□□ 0.83
NDUFS3O75489 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NDUFS3O75489 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NDUFS3O75489 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NDUFS3O75489 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.23■□□□□ 0.83
NDUFS3O75489 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NDUFS3O75489 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NDUFS3O75489 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NDUFS3O75489 AC007322.1-201ENST00000426983 750 ntBASIC20.23■□□□□ 0.83
NDUFS3O75489 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.23■□□□□ 0.83
NDUFS3O75489 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NDUFS3O75489 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.23■□□□□ 0.83
NDUFS3O75489 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.23■□□□□ 0.83
NDUFS3O75489 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.23■□□□□ 0.83
NDUFS3O75489 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
NDUFS3O75489 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NDUFS3O75489 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NDUFS3O75489 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NDUFS3O75489 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
NDUFS3O75489 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS3O75489 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
NDUFS3O75489 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS3O75489 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS3O75489 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NDUFS3O75489 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS3O75489 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.22■□□□□ 0.83
NDUFS3O75489 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS3O75489 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.22■□□□□ 0.83
NDUFS3O75489 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS3O75489 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
NDUFS3O75489 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS3O75489 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS3O75489 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NDUFS3O75489 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
NDUFS3O75489 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS3O75489 AC073130.3-201ENST00000624389 2278 ntBASIC20.22■□□□□ 0.83
NDUFS3O75489 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS3O75489 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS3O75489 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.21■□□□□ 0.83
NDUFS3O75489 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS3O75489 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
NDUFS3O75489 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.21■□□□□ 0.83
NDUFS3O75489 RARRES2P4-201ENST00000514074 484 ntBASIC20.21■□□□□ 0.83
NDUFS3O75489 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.21■□□□□ 0.83
NDUFS3O75489 CYP21A1P-202ENST00000354927 1481 ntBASIC20.21■□□□□ 0.83
NDUFS3O75489 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NDUFS3O75489 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS3O75489 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS3O75489 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS3O75489 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NDUFS3O75489 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.21■□□□□ 0.83
NDUFS3O75489 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NDUFS3O75489 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.2■□□□□ 0.82
NDUFS3O75489 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS3O75489 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.2■□□□□ 0.82
NDUFS3O75489 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms