Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.06■□□□□ 0.64
PRAMEF2O60811 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF2O60811 AC007225.1-201ENST00000566331 1836 ntBASIC19.06■□□□□ 0.64
PRAMEF2O60811 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF2O60811 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF2O60811 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PRAMEF2O60811 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF2O60811 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.05■□□□□ 0.64
PRAMEF2O60811 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
PRAMEF2O60811 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF2O60811 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF2O60811 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF2O60811 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF2O60811 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PRAMEF2O60811 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF2O60811 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF2O60811 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.05■□□□□ 0.64
PRAMEF2O60811 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
PRAMEF2O60811 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF2O60811 AC091874.3-201ENST00000512672 1195 ntBASIC19.05■□□□□ 0.64
PRAMEF2O60811 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.05■□□□□ 0.64
PRAMEF2O60811 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.05■□□□□ 0.64
PRAMEF2O60811 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF2O60811 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF2O60811 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF2O60811 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF2O60811 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.05■□□□□ 0.64
PRAMEF2O60811 FP700111.2-201ENST00000619190 1892 ntBASIC19.05■□□□□ 0.64
PRAMEF2O60811 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PRAMEF2O60811 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF2O60811 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PRAMEF2O60811 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PRAMEF2O60811 LSM12P1-201ENST00000411836 588 ntBASIC19.04■□□□□ 0.64
PRAMEF2O60811 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.04■□□□□ 0.64
PRAMEF2O60811 DUSP5P2-201ENST00000426873 1033 ntBASIC19.04■□□□□ 0.64
PRAMEF2O60811 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.04■□□□□ 0.64
PRAMEF2O60811 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF2O60811 AC100791.3-201ENST00000617619 330 ntBASIC19.04■□□□□ 0.64
PRAMEF2O60811 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF2O60811 MIR2861-201ENST00000636310 90 ntBASIC19.04■□□□□ 0.64
PRAMEF2O60811 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.04■□□□□ 0.64
PRAMEF2O60811 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PRAMEF2O60811 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF2O60811 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF2O60811 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF2O60811 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF2O60811 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PRAMEF2O60811 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.03■□□□□ 0.64
PRAMEF2O60811 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF2O60811 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF2O60811 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF2O60811 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.03■□□□□ 0.64
PRAMEF2O60811 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PRAMEF2O60811 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.03■□□□□ 0.64
PRAMEF2O60811 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF2O60811 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF2O60811 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF2O60811 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PRAMEF2O60811 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.03■□□□□ 0.64
PRAMEF2O60811 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.03■□□□□ 0.64
PRAMEF2O60811 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.03■□□□□ 0.64
PRAMEF2O60811 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF2O60811 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.03■□□□□ 0.64
PRAMEF2O60811 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF2O60811 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.03■□□□□ 0.64
PRAMEF2O60811 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF2O60811 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF2O60811 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF2O60811 CYP21A1P-202ENST00000354927 1481 ntBASIC19.03■□□□□ 0.64
PRAMEF2O60811 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PRAMEF2O60811 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEF2O60811 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEF2O60811 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEF2O60811 AC087633.2-202ENST00000565166 1439 ntBASIC19.02■□□□□ 0.64
PRAMEF2O60811 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEF2O60811 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEF2O60811 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEF2O60811 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEF2O60811 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEF2O60811 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEF2O60811 KRT18P29-201ENST00000397031 1267 ntBASIC19.02■□□□□ 0.64
PRAMEF2O60811 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEF2O60811 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
PRAMEF2O60811 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.02■□□□□ 0.64
PRAMEF2O60811 ITM2C-210ENST00000620962 501 ntBASIC19.02■□□□□ 0.64
PRAMEF2O60811 AC066615.1-201ENST00000640911 628 ntBASIC19.02■□□□□ 0.64
PRAMEF2O60811 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PRAMEF2O60811 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEF2O60811 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRAMEF2O60811 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.02■□□□□ 0.63
PRAMEF2O60811 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
PRAMEF2O60811 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRAMEF2O60811 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
PRAMEF2O60811 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRAMEF2O60811 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRAMEF2O60811 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEF2O60811 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEF2O60811 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.01■□□□□ 0.63
PRAMEF2O60811 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEF2O60811 MCRIP2P1-201ENST00000394346 511 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms