Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXD2O60548 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.42■□□□□ 0.86
FOXD2O60548 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXD2O60548 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXD2O60548 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXD2O60548 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXD2O60548 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXD2O60548 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
FOXD2O60548 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXD2O60548 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXD2O60548 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.42■□□□□ 0.86
FOXD2O60548 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXD2O60548 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXD2O60548 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.42■□□□□ 0.86
FOXD2O60548 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXD2O60548 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FOXD2O60548 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FOXD2O60548 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXD2O60548 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
FOXD2O60548 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXD2O60548 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXD2O60548 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXD2O60548 FBXW4P1-201ENST00000426721 2239 ntBASIC20.41■□□□□ 0.86
FOXD2O60548 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXD2O60548 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
FOXD2O60548 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.41■□□□□ 0.86
FOXD2O60548 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXD2O60548 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.41■□□□□ 0.86
FOXD2O60548 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.41■□□□□ 0.86
FOXD2O60548 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FOXD2O60548 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXD2O60548 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
FOXD2O60548 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.41■□□□□ 0.86
FOXD2O60548 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.41■□□□□ 0.86
FOXD2O60548 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXD2O60548 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.41■□□□□ 0.86
FOXD2O60548 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
FOXD2O60548 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD2O60548 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD2O60548 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD2O60548 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD2O60548 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD2O60548 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXD2O60548 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXD2O60548 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD2O60548 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.4■□□□□ 0.86
FOXD2O60548 AL049597.2-201ENST00000565575 961 ntBASIC20.4■□□□□ 0.86
FOXD2O60548 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
FOXD2O60548 AC061975.6-201ENST00000579045 1553 ntBASIC20.4■□□□□ 0.86
FOXD2O60548 AC242852.2-201ENST00000615738 1807 ntBASIC20.4■□□□□ 0.86
FOXD2O60548 AC113410.3-201ENST00000623366 203 ntBASIC20.4■□□□□ 0.86
FOXD2O60548 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FOXD2O60548 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
FOXD2O60548 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
FOXD2O60548 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
FOXD2O60548 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.39■□□□□ 0.86
FOXD2O60548 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
FOXD2O60548 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FOXD2O60548 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FOXD2O60548 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
FOXD2O60548 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FOXD2O60548 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD2O60548 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.39■□□□□ 0.85
FOXD2O60548 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
FOXD2O60548 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD2O60548 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD2O60548 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
FOXD2O60548 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD2O60548 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD2O60548 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
FOXD2O60548 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD2O60548 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
FOXD2O60548 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD2O60548 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD2O60548 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
FOXD2O60548 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD2O60548 PRKY-204ENST00000533551 1019 ntBASIC20.39■□□□□ 0.85
FOXD2O60548 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.39■□□□□ 0.85
FOXD2O60548 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.39■□□□□ 0.85
FOXD2O60548 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.39■□□□□ 0.85
FOXD2O60548 AC092865.7-201ENST00000641832 219 ntBASIC20.39■□□□□ 0.85
FOXD2O60548 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXD2O60548 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
FOXD2O60548 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD2O60548 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD2O60548 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD2O60548 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD2O60548 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD2O60548 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXD2O60548 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD2O60548 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
FOXD2O60548 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXD2O60548 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD2O60548 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.38■□□□□ 0.85
FOXD2O60548 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXD2O60548 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD2O60548 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD2O60548 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXD2O60548 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
FOXD2O60548 AC026310.3-201ENST00000625186 2373 ntBASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms