Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AC013268.1-206ENST00000638368 961 ntBASIC19.4■□□□□ 0.7
PCDH7O60245 AC112229.1-201ENST00000639295 961 ntBASIC19.4■□□□□ 0.7
PCDH7O60245 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH7O60245 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
PCDH7O60245 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH7O60245 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDH7O60245 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
PCDH7O60245 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.39■□□□□ 0.7
PCDH7O60245 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.39■□□□□ 0.7
PCDH7O60245 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCDH7O60245 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH7O60245 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH7O60245 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PCDH7O60245 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDH7O60245 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDH7O60245 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH7O60245 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.39■□□□□ 0.69
PCDH7O60245 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
PCDH7O60245 MFSD11-216ENST00000590393 1141 ntBASIC19.39■□□□□ 0.69
PCDH7O60245 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PCDH7O60245 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH7O60245 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDH7O60245 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH7O60245 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH7O60245 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDH7O60245 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDH7O60245 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH7O60245 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH7O60245 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH7O60245 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH7O60245 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDH7O60245 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDH7O60245 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH7O60245 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PCDH7O60245 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH7O60245 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
PCDH7O60245 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH7O60245 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDH7O60245 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH7O60245 AC007322.4-201ENST00000509611 723 ntBASIC19.38■□□□□ 0.69
PCDH7O60245 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH7O60245 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH7O60245 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH7O60245 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.38■□□□□ 0.69
PCDH7O60245 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PCDH7O60245 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDH7O60245 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH7O60245 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH7O60245 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDH7O60245 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH7O60245 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH7O60245 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH7O60245 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH7O60245 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PCDH7O60245 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH7O60245 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH7O60245 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDH7O60245 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH7O60245 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH7O60245 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDH7O60245 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH7O60245 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDH7O60245 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH7O60245 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
PCDH7O60245 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PCDH7O60245 PCDHAC2-203ENST00000615316 3011 ntBASIC19.37■□□□□ 0.69
PCDH7O60245 AC099778.1-201ENST00000568593 1911 ntBASIC19.37■□□□□ 0.69
PCDH7O60245 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH7O60245 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDH7O60245 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH7O60245 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH7O60245 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH7O60245 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH7O60245 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PCDH7O60245 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PCDH7O60245 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH7O60245 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH7O60245 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDH7O60245 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH7O60245 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDH7O60245 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH7O60245 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDH7O60245 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDH7O60245 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.36■□□□□ 0.69
PCDH7O60245 MIR5787-201ENST00000611784 55 ntBASIC19.36■□□□□ 0.69
PCDH7O60245 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH7O60245 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH7O60245 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH7O60245 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDH7O60245 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PCDH7O60245 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDH7O60245 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH7O60245 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH7O60245 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH7O60245 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH7O60245 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH7O60245 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH7O60245 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH7O60245 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH7O60245 SMG8-203ENST00000578922 2178 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms