Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.73■□□□□ 0.75
PEX1O43933 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX1O43933 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PEX1O43933 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX1O43933 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX1O43933 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PEX1O43933 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX1O43933 AP004607.4-201ENST00000530158 1459 ntBASIC19.73■□□□□ 0.75
PEX1O43933 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX1O43933 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX1O43933 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX1O43933 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX1O43933 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX1O43933 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PEX1O43933 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.72■□□□□ 0.75
PEX1O43933 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.72■□□□□ 0.75
PEX1O43933 AC079140.4-201ENST00000507448 529 ntBASIC19.72■□□□□ 0.75
PEX1O43933 KRT18P61-201ENST00000585825 1298 ntBASIC19.72■□□□□ 0.75
PEX1O43933 AC004854.2-201ENST00000608450 1441 ntBASIC19.72■□□□□ 0.75
PEX1O43933 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.72■□□□□ 0.75
PEX1O43933 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX1O43933 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
PEX1O43933 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX1O43933 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX1O43933 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX1O43933 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PEX1O43933 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PEX1O43933 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX1O43933 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX1O43933 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX1O43933 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.71■□□□□ 0.75
PEX1O43933 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PEX1O43933 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX1O43933 AC009237.3-201ENST00000393279 1427 ntBASIC19.71■□□□□ 0.75
PEX1O43933 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PEX1O43933 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX1O43933 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.71■□□□□ 0.75
PEX1O43933 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.71■□□□□ 0.75
PEX1O43933 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.71■□□□□ 0.75
PEX1O43933 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.71■□□□□ 0.75
PEX1O43933 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.71■□□□□ 0.75
PEX1O43933 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.71■□□□□ 0.75
PEX1O43933 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX1O43933 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX1O43933 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX1O43933 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.71■□□□□ 0.75
PEX1O43933 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PEX1O43933 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PEX1O43933 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX1O43933 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PEX1O43933 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.71■□□□□ 0.75
PEX1O43933 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PEX1O43933 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.7■□□□□ 0.74
PEX1O43933 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PEX1O43933 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PEX1O43933 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PEX1O43933 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.7■□□□□ 0.74
PEX1O43933 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PEX1O43933 AC090192.1-201ENST00000517740 490 ntBASIC19.7■□□□□ 0.74
PEX1O43933 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PEX1O43933 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.7■□□□□ 0.74
PEX1O43933 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PEX1O43933 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.7■□□□□ 0.74
PEX1O43933 AC005224.4-201ENST00000583262 1652 ntBASIC19.7■□□□□ 0.74
PEX1O43933 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PEX1O43933 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
PEX1O43933 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PEX1O43933 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PEX1O43933 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PEX1O43933 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.7■□□□□ 0.74
PEX1O43933 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PEX1O43933 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PEX1O43933 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.7■□□□□ 0.74
PEX1O43933 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PEX1O43933 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PEX1O43933 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PEX1O43933 OR7E47P-201ENST00000546390 1422 ntBASIC19.69■□□□□ 0.74
PEX1O43933 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PEX1O43933 AC112907.3-201ENST00000577781 2400 ntBASIC19.69■□□□□ 0.74
PEX1O43933 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PEX1O43933 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.69■□□□□ 0.74
PEX1O43933 AC137761.2-201ENST00000561729 223 ntBASIC19.69■□□□□ 0.74
PEX1O43933 AC145350.3-201ENST00000569033 163 ntBASIC19.69■□□□□ 0.74
PEX1O43933 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.69■□□□□ 0.74
PEX1O43933 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PEX1O43933 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.69■□□□□ 0.74
PEX1O43933 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PEX1O43933 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PEX1O43933 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.69■□□□□ 0.74
PEX1O43933 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PEX1O43933 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PEX1O43933 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PEX1O43933 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PEX1O43933 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PEX1O43933 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
PEX1O43933 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PEX1O43933 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PEX1O43933 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PEX1O43933 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PEX1O43933 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms