Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 CROCCP5-201ENST00000436658 830 ntBASIC18.12■□□□□ 0.49
TRAF3IP2O43734 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TRAF3IP2O43734 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAF3IP2O43734 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAF3IP2O43734 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAF3IP2O43734 AC093787.1-201ENST00000450396 207 ntBASIC18.11■□□□□ 0.49
TRAF3IP2O43734 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAF3IP2O43734 AC133552.2-202ENST00000575694 574 ntBASIC18.11■□□□□ 0.49
TRAF3IP2O43734 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRAF3IP2O43734 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAF3IP2O43734 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP2O43734 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP2O43734 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAF3IP2O43734 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
TRAF3IP2O43734 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP2O43734 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAF3IP2O43734 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP2O43734 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP2O43734 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP2O43734 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 AC010980.2-201ENST00000587099 1412 ntBASIC18.1■□□□□ 0.49
TRAF3IP2O43734 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 AL512625.2-201ENST00000417533 625 ntBASIC18.1■□□□□ 0.49
TRAF3IP2O43734 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 CYP2T3P-201ENST00000601990 817 ntBASIC18.1■□□□□ 0.49
TRAF3IP2O43734 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRAF3IP2O43734 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAF3IP2O43734 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAF3IP2O43734 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
TRAF3IP2O43734 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAF3IP2O43734 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRAF3IP2O43734 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.08■□□□□ 0.49
TRAF3IP2O43734 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
TRAF3IP2O43734 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
TRAF3IP2O43734 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRAF3IP2O43734 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms