Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.39■□□□□ 0.53
SMAD9O15198 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMAD9O15198 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SMAD9O15198 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SMAD9O15198 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SMAD9O15198 AL157384.1-201ENST00000445995 2473 ntBASIC18.39■□□□□ 0.53
SMAD9O15198 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.39■□□□□ 0.53
SMAD9O15198 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD9O15198 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD9O15198 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.38■□□□□ 0.53
SMAD9O15198 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SMAD9O15198 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.38■□□□□ 0.53
SMAD9O15198 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD9O15198 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD9O15198 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD9O15198 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD9O15198 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD9O15198 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.38■□□□□ 0.53
SMAD9O15198 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD9O15198 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.38■□□□□ 0.53
SMAD9O15198 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.38■□□□□ 0.53
SMAD9O15198 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD9O15198 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.38■□□□□ 0.53
SMAD9O15198 AC083906.2-201ENST00000511578 360 ntBASIC18.38■□□□□ 0.53
SMAD9O15198 AF201337.1-201ENST00000520239 748 ntBASIC18.38■□□□□ 0.53
SMAD9O15198 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.38■□□□□ 0.53
SMAD9O15198 AC105036.2-201ENST00000569468 176 ntBASIC18.38■□□□□ 0.53
SMAD9O15198 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SMAD9O15198 AL121832.2-201ENST00000610979 668 ntBASIC18.38■□□□□ 0.53
SMAD9O15198 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.38■□□□□ 0.53
SMAD9O15198 PLK5-205ENST00000642079 1969 ntBASIC18.38■□□□□ 0.53
SMAD9O15198 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD9O15198 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD9O15198 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD9O15198 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SMAD9O15198 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SMAD9O15198 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SMAD9O15198 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.38■□□□□ 0.53
SMAD9O15198 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD9O15198 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.37■□□□□ 0.53
SMAD9O15198 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD9O15198 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD9O15198 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SMAD9O15198 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SMAD9O15198 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.37■□□□□ 0.53
SMAD9O15198 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD9O15198 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD9O15198 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD9O15198 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD9O15198 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.37■□□□□ 0.53
SMAD9O15198 AC092667.1-201ENST00000434301 2586 ntBASIC18.37■□□□□ 0.53
SMAD9O15198 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD9O15198 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD9O15198 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD9O15198 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
SMAD9O15198 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SMAD9O15198 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD9O15198 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
SMAD9O15198 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.36■□□□□ 0.53
SMAD9O15198 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD9O15198 GPX1P1-201ENST00000388829 606 ntBASIC18.36■□□□□ 0.53
SMAD9O15198 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SMAD9O15198 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD9O15198 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD9O15198 AL512625.2-201ENST00000417533 625 ntBASIC18.36■□□□□ 0.53
SMAD9O15198 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.36■□□□□ 0.53
SMAD9O15198 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD9O15198 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD9O15198 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.36■□□□□ 0.53
SMAD9O15198 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
SMAD9O15198 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.36■□□□□ 0.53
SMAD9O15198 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SMAD9O15198 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD9O15198 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD9O15198 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.35■□□□□ 0.53
SMAD9O15198 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD9O15198 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SMAD9O15198 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.35■□□□□ 0.53
SMAD9O15198 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD9O15198 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD9O15198 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.35■□□□□ 0.53
SMAD9O15198 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD9O15198 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.35■□□□□ 0.53
SMAD9O15198 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD9O15198 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD9O15198 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD9O15198 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SMAD9O15198 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.35■□□□□ 0.53
SMAD9O15198 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD9O15198 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD9O15198 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.35■□□□□ 0.53
SMAD9O15198 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.35■□□□□ 0.53
SMAD9O15198 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD9O15198 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD9O15198 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD9O15198 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD9O15198 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD9O15198 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD9O15198 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
SMAD9O15198 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms