Protein–RNA interactions for Protein: A6NNJ1

FAM90A9P, Putative protein FAM90A9P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A9PA6NNJ1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
FAM90A9PA6NNJ1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 AC116050.2-201ENST00000612102 1779 ntBASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.6■□□□□ 0.25
FAM90A9PA6NNJ1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 CDV3P1-201ENST00000471403 739 ntBASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 FAM21FP-204ENST00000608637 956 ntBASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM90A9PA6NNJ1 AL512408.1-201ENST00000569378 2000 ntBASIC16.58■□□□□ 0.25
FAM90A9PA6NNJ1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FAM90A9PA6NNJ1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FAM90A9PA6NNJ1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FAM90A9PA6NNJ1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.58■□□□□ 0.24
FAM90A9PA6NNJ1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FAM90A9PA6NNJ1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
FAM90A9PA6NNJ1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FAM90A9PA6NNJ1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
FAM90A9PA6NNJ1 CROCCP5-201ENST00000436658 830 ntBASIC16.58■□□□□ 0.24
FAM90A9PA6NNJ1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.58■□□□□ 0.24
FAM90A9PA6NNJ1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
FAM90A9PA6NNJ1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.58■□□□□ 0.24
FAM90A9PA6NNJ1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.58■□□□□ 0.24
FAM90A9PA6NNJ1 AC005181.1-201ENST00000604782 1256 ntBASIC16.58■□□□□ 0.24
FAM90A9PA6NNJ1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FAM90A9PA6NNJ1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
FAM90A9PA6NNJ1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
FAM90A9PA6NNJ1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FAM90A9PA6NNJ1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FAM90A9PA6NNJ1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
FAM90A9PA6NNJ1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.57■□□□□ 0.24
FAM90A9PA6NNJ1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A9PA6NNJ1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.57■□□□□ 0.24
FAM90A9PA6NNJ1 AC092720.2-201ENST00000602388 1665 ntBASIC16.57■□□□□ 0.24
FAM90A9PA6NNJ1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A9PA6NNJ1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FAM90A9PA6NNJ1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms