Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.89■■□□□ 1.1
LRRC53A6NM62 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
LRRC53A6NM62 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.89■■□□□ 1.09
LRRC53A6NM62 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
LRRC53A6NM62 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.89■■□□□ 1.09
LRRC53A6NM62 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRRC53A6NM62 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRRC53A6NM62 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LRRC53A6NM62 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
LRRC53A6NM62 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LRRC53A6NM62 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRRC53A6NM62 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRRC53A6NM62 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LRRC53A6NM62 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LRRC53A6NM62 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.89■■□□□ 1.09
LRRC53A6NM62 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRRC53A6NM62 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRRC53A6NM62 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
LRRC53A6NM62 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.89■■□□□ 1.09
LRRC53A6NM62 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.89■■□□□ 1.09
LRRC53A6NM62 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRC53A6NM62 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.88■■□□□ 1.09
LRRC53A6NM62 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
LRRC53A6NM62 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.88■■□□□ 1.09
LRRC53A6NM62 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
LRRC53A6NM62 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
LRRC53A6NM62 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRC53A6NM62 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRRC53A6NM62 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.88■■□□□ 1.09
LRRC53A6NM62 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.88■■□□□ 1.09
LRRC53A6NM62 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.88■■□□□ 1.09
LRRC53A6NM62 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRC53A6NM62 UBE2DNL-204ENST00000602536 740 ntBASIC21.88■■□□□ 1.09
LRRC53A6NM62 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRC53A6NM62 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRC53A6NM62 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRC53A6NM62 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRC53A6NM62 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.88■■□□□ 1.09
LRRC53A6NM62 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.88■■□□□ 1.09
LRRC53A6NM62 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRRC53A6NM62 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.88■■□□□ 1.09
LRRC53A6NM62 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.88■■□□□ 1.09
LRRC53A6NM62 DPP3P2-201ENST00000416030 1696 ntBASIC21.88■■□□□ 1.09
LRRC53A6NM62 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRC53A6NM62 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRRC53A6NM62 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC53A6NM62 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
LRRC53A6NM62 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
LRRC53A6NM62 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC53A6NM62 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC53A6NM62 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.87■■□□□ 1.09
LRRC53A6NM62 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
LRRC53A6NM62 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.87■■□□□ 1.09
LRRC53A6NM62 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC53A6NM62 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC53A6NM62 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC53A6NM62 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.87■■□□□ 1.09
LRRC53A6NM62 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.87■■□□□ 1.09
LRRC53A6NM62 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.87■■□□□ 1.09
LRRC53A6NM62 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.87■■□□□ 1.09
LRRC53A6NM62 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC53A6NM62 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.87■■□□□ 1.09
LRRC53A6NM62 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
LRRC53A6NM62 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC53A6NM62 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC53A6NM62 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
LRRC53A6NM62 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC53A6NM62 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC53A6NM62 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRRC53A6NM62 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
LRRC53A6NM62 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRRC53A6NM62 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRRC53A6NM62 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRRC53A6NM62 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRRC53A6NM62 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRRC53A6NM62 KRT19P1-201ENST00000405746 1186 ntBASIC21.86■■□□□ 1.09
LRRC53A6NM62 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.86■■□□□ 1.09
LRRC53A6NM62 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRRC53A6NM62 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRRC53A6NM62 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRRC53A6NM62 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRRC53A6NM62 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRRC53A6NM62 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.85■■□□□ 1.09
LRRC53A6NM62 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.85■■□□□ 1.09
LRRC53A6NM62 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC53A6NM62 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.85■■□□□ 1.09
LRRC53A6NM62 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
LRRC53A6NM62 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC53A6NM62 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC53A6NM62 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC53A6NM62 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.85■■□□□ 1.09
LRRC53A6NM62 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.85■■□□□ 1.09
LRRC53A6NM62 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
LRRC53A6NM62 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.85■■□□□ 1.09
LRRC53A6NM62 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LRRC53A6NM62 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.85■■□□□ 1.09
LRRC53A6NM62 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC53A6NM62 AC125437.2-201ENST00000625180 2167 ntBASIC21.85■■□□□ 1.09
LRRC53A6NM62 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC53A6NM62 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms