Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 AL023875.1-201ENST00000640777 796 ntBASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 EP400NL-214ENST00000641289 2402 ntBASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3BA6NDS4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3BA6NDS4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 AC239809.2-201ENST00000415381 517 ntBASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 MIR4497-201ENST00000583208 89 ntBASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 AC027702.1-201ENST00000563810 1770 ntBASIC20.67■□□□□ 0.9
TBC1D3BA6NDS4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3BA6NDS4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TBC1D3BA6NDS4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TBC1D3BA6NDS4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3BA6NDS4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.66■□□□□ 0.9
TBC1D3BA6NDS4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.66■□□□□ 0.9
TBC1D3BA6NDS4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3BA6NDS4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.66■□□□□ 0.9
TBC1D3BA6NDS4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3BA6NDS4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3BA6NDS4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3BA6NDS4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3BA6NDS4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3BA6NDS4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3BA6NDS4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms