Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC189A1A4V9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC189A1A4V9 AC098818.2-201ENST00000564925 2320 ntBASIC20.25■□□□□ 0.83
CCDC189A1A4V9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC189A1A4V9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC189A1A4V9 MIR638-201ENST00000385237 100 ntBASIC20.25■□□□□ 0.83
CCDC189A1A4V9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.25■□□□□ 0.83
CCDC189A1A4V9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC189A1A4V9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC189A1A4V9 TERF1P2-201ENST00000583350 1212 ntBASIC20.25■□□□□ 0.83
CCDC189A1A4V9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC189A1A4V9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC189A1A4V9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC189A1A4V9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC189A1A4V9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC189A1A4V9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC189A1A4V9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC189A1A4V9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC189A1A4V9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 SLC7A5P1-201ENST00000568957 537 ntBASIC20.24■□□□□ 0.83
CCDC189A1A4V9 CCDC92B-201ENST00000575506 885 ntBASIC20.24■□□□□ 0.83
CCDC189A1A4V9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC189A1A4V9 AC027702.1-201ENST00000563810 1770 ntBASIC20.23■□□□□ 0.83
CCDC189A1A4V9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 YBX1P1-201ENST00000445822 960 ntBASIC20.23■□□□□ 0.83
CCDC189A1A4V9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 BX323043.1-201ENST00000641006 1765 ntBASIC20.23■□□□□ 0.83
CCDC189A1A4V9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC189A1A4V9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC189A1A4V9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC189A1A4V9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CCDC189A1A4V9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC189A1A4V9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
CCDC189A1A4V9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC189A1A4V9 AC020907.5-201ENST00000624372 1936 ntBASIC20.22■□□□□ 0.83
CCDC189A1A4V9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC189A1A4V9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC189A1A4V9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CCDC189A1A4V9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC189A1A4V9 AC243732.1-201ENST00000612648 864 ntBASIC20.22■□□□□ 0.83
CCDC189A1A4V9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC189A1A4V9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC189A1A4V9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC189A1A4V9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC189A1A4V9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC189A1A4V9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC189A1A4V9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms