Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC163A0A0D9SF12 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC163A0A0D9SF12 AL121906.2-201ENST00000621597 723 ntBASIC20.23■□□□□ 0.83
CCDC163A0A0D9SF12 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC163A0A0D9SF12 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CCDC163A0A0D9SF12 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC163A0A0D9SF12 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
CCDC163A0A0D9SF12 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC163A0A0D9SF12 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC163A0A0D9SF12 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC163A0A0D9SF12 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC163A0A0D9SF12 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC163A0A0D9SF12 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC163A0A0D9SF12 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC163A0A0D9SF12 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.22■□□□□ 0.83
CCDC163A0A0D9SF12 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC163A0A0D9SF12 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.22■□□□□ 0.83
CCDC163A0A0D9SF12 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC163A0A0D9SF12 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC163A0A0D9SF12 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC163A0A0D9SF12 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CCDC163A0A0D9SF12 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC163A0A0D9SF12 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC163A0A0D9SF12 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC163A0A0D9SF12 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC163A0A0D9SF12 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC163A0A0D9SF12 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC163A0A0D9SF12 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC163A0A0D9SF12 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC163A0A0D9SF12 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC163A0A0D9SF12 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.21■□□□□ 0.83
CCDC163A0A0D9SF12 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC163A0A0D9SF12 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC163A0A0D9SF12 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC163A0A0D9SF12 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC163A0A0D9SF12 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC163A0A0D9SF12 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC163A0A0D9SF12 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC163A0A0D9SF12 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CCDC163A0A0D9SF12 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CCDC163A0A0D9SF12 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.83
CCDC163A0A0D9SF12 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC163A0A0D9SF12 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC163A0A0D9SF12 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CCDC163A0A0D9SF12 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC163A0A0D9SF12 AC113347.1-201ENST00000413321 391 ntBASIC20.2■□□□□ 0.82
CCDC163A0A0D9SF12 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC163A0A0D9SF12 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC163A0A0D9SF12 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC163A0A0D9SF12 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC163A0A0D9SF12 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC163A0A0D9SF12 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC163A0A0D9SF12 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC163A0A0D9SF12 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC163A0A0D9SF12 AC079598.2-202ENST00000546624 1451 ntBASIC20.19■□□□□ 0.82
CCDC163A0A0D9SF12 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC163A0A0D9SF12 AC005521.1-201ENST00000393351 872 ntBASIC20.19■□□□□ 0.82
CCDC163A0A0D9SF12 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC163A0A0D9SF12 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC163A0A0D9SF12 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC163A0A0D9SF12 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.19■□□□□ 0.82
CCDC163A0A0D9SF12 AL031963.3-201ENST00000606441 850 ntBASIC20.19■□□□□ 0.82
CCDC163A0A0D9SF12 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC163A0A0D9SF12 REXO1L10P-201ENST00000615707 1290 ntBASIC20.19■□□□□ 0.82
CCDC163A0A0D9SF12 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC163A0A0D9SF12 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC163A0A0D9SF12 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC163A0A0D9SF12 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC163A0A0D9SF12 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC163A0A0D9SF12 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 AP002982.1-201ENST00000492365 877 ntBASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 KRT18P22-201ENST00000402024 1347 ntBASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC163A0A0D9SF12 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC163A0A0D9SF12 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC163A0A0D9SF12 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC163A0A0D9SF12 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CCDC163A0A0D9SF12 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC163A0A0D9SF12 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC163A0A0D9SF12 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC163A0A0D9SF12 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC163A0A0D9SF12 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC163A0A0D9SF12 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC163A0A0D9SF12 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC163A0A0D9SF12 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms