Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 AC026310.3-201ENST00000625186 2373 ntBASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 ABHD17AP1-201ENST00000358206 933 ntBASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IGHV4-28A0A0C4DH34 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 FAM201B-201ENST00000458407 597 ntBASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 AC027702.1-201ENST00000563810 1770 ntBASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
IGHV4-28A0A0C4DH34 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 C2orf69P4-201ENST00000565394 541 ntBASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.66□□□□□ -0.06
IGHV4-28A0A0C4DH34 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
IGHV4-28A0A0C4DH34 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms