Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAV5A0A0B4J249 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
TRAV5A0A0B4J249 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
TRAV5A0A0B4J249 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 MIR572-201ENST00000384983 95 ntBASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 AL020996.1-203ENST00000536896 2307 ntBASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV5A0A0B4J249 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 RARRES2P11-201ENST00000635158 484 ntBASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV5A0A0B4J249 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 PBX2P1-201ENST00000493219 1291 ntBASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 AC027682.1-201ENST00000562846 899 ntBASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 AC008175.2-201ENST00000612840 297 ntBASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRAV5A0A0B4J249 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV5A0A0B4J249 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms