Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 IGHV3-54-201ENST00000622166 353 ntBASIC8.9□□□□□ -0.98
SYCE2Q6PIF2 MYO6-203ENST00000369981 8692 ntTSL 5 BASIC8.9□□□□□ -0.98
SYCE2Q6PIF2 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC8.9□□□□□ -0.98
SYCE2Q6PIF2 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC8.9□□□□□ -0.98
SYCE2Q6PIF2 LOXHD1-211ENST00000579038 3632 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
SYCE2Q6PIF2 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
SYCE2Q6PIF2 RAB3GAP1-201ENST00000264158 4914 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
SYCE2Q6PIF2 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
SYCE2Q6PIF2 NUDT5-207ENST00000491614 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
SYCE2Q6PIF2 STAG3-202ENST00000394018 4163 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.99
SYCE2Q6PIF2 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC8.9□□□□□ -0.99
SYCE2Q6PIF2 GPM6A-221ENST00000515090 1500 ntTSL 2 BASIC8.9□□□□□ -0.99
SYCE2Q6PIF2 CALD1-202ENST00000361901 4114 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
SYCE2Q6PIF2 SULT1C2-201ENST00000251481 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
SYCE2Q6PIF2 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 AL161636.1-201ENST00000427145 2254 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 LINC00858-201ENST00000415469 2685 ntTSL 2 BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 AC008543.1-201ENST00000344893 3383 ntTSL 2 BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 TUBBP10-201ENST00000427668 1301 ntBASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 AC239799.2-201ENST00000622359 2002 ntBASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 PRR32-201ENST00000371125 1228 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 AL122008.2-201ENST00000412915 570 ntBASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 AC113607.1-201ENST00000427019 589 ntTSL 4 BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 AF186996.3-201ENST00000509527 964 ntBASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 FTH1-207ENST00000532601 742 ntTSL 3 BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 AC019209.1-201ENST00000544399 486 ntTSL 2 BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 AC026401.2-201ENST00000576454 503 ntTSL 3 BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 MIR4793-201ENST00000577502 87 ntBASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 NDUFA3P1-201ENST00000588007 252 ntBASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 AL133520.1-201ENST00000610430 700 ntBASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 AL451054.3-201ENST00000611115 776 ntBASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 KIF2B-201ENST00000268919 2313 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 AL353795.3-201ENST00000624351 5702 ntBASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 MOBP-202ENST00000383754 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SYCE2Q6PIF2 MAN1A2P1-201ENST00000590286 1400 ntBASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 RAB3IP-218ENST00000553099 2674 ntTSL 2 BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 RAB3GAP1-203ENST00000442034 4185 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 FAM193A-204ENST00000505311 4110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 C16orf62-205ENST00000513947 2501 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 FAM193A-210ENST00000545951 3987 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 HRH4-201ENST00000256906 3668 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 NCOA4P4-201ENST00000513338 1861 ntBASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 SNORD46-201ENST00000364043 104 ntBASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 MXI1-204ENST00000369612 879 ntTSL 3 BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 RNA5SP256-201ENST00000390978 113 ntBASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 AL356432.2-201ENST00000407841 422 ntBASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 RNA5SP265-201ENST00000411023 111 ntBASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 LINCMD1-201ENST00000418518 462 ntTSL 5 BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 AL591896.1-201ENST00000420211 491 ntTSL 2 BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 AC107302.1-201ENST00000467059 1032 ntBASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 AL355076.1-201ENST00000484315 270 ntBASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 MRPS27-207ENST00000515404 1183 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 RFPL4AP7-201ENST00000520120 215 ntBASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 AC087280.1-201ENST00000530632 1003 ntBASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 ST3GAL4-219ENST00000534457 987 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 IGKV3OR2-5-201ENST00000605851 281 ntBASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 AC139792.1-201ENST00000607051 647 ntBASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 AC005790.1-201ENST00000619774 450 ntBASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 ACSL6-206ENST00000379255 2301 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 AC245060.6-201ENST00000624350 8420 ntBASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 NLRP1-204ENST00000354411 4332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYCE2Q6PIF2 AL133384.2-201ENST00000623755 2954 ntBASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms