Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 AC018880.1-201ENST00000418898 1319 ntBASIC8.9□□□□□ -0.98
LMO3Q8TAP4 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 IL26-201ENST00000229134 1075 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 OR4N4-201ENST00000328795 1126 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 TIMD4-202ENST00000406964 581 ntTSL 2 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 RPL7AP72-201ENST00000417266 768 ntBASIC8.9□□□□□ -0.98
LMO3Q8TAP4 MICU1-204ENST00000418483 1212 ntTSL 2 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 AL671986.1-201ENST00000422197 955 ntBASIC8.9□□□□□ -0.98
LMO3Q8TAP4 Z74696.1-201ENST00000428208 1123 ntBASIC8.9□□□□□ -0.98
LMO3Q8TAP4 AP002383.1-201ENST00000439405 720 ntBASIC8.9□□□□□ -0.98
LMO3Q8TAP4 AL080317.1-201ENST00000444259 557 ntTSL 2 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 CHRM3-AS1-201ENST00000444721 486 ntTSL 2 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 AL109945.1-201ENST00000448134 687 ntTSL 2 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 RFC3P1-201ENST00000454568 682 ntBASIC8.9□□□□□ -0.98
LMO3Q8TAP4 MYB-AS1-201ENST00000455534 449 ntTSL 2 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 TRIM2-207ENST00000482578 773 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 AC114964.1-201ENST00000502306 1111 ntBASIC8.9□□□□□ -0.98
LMO3Q8TAP4 AC112203.1-201ENST00000506315 1020 ntBASIC8.9□□□□□ -0.98
LMO3Q8TAP4 PPM1K-204ENST00000508256 923 ntTSL 2 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 AC093281.1-201ENST00000514239 549 ntBASIC8.9□□□□□ -0.98
LMO3Q8TAP4 RNA5SP101-201ENST00000517036 108 ntBASIC8.9□□□□□ -0.98
LMO3Q8TAP4 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 AC011379.2-201ENST00000523154 583 ntTSL 4 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 DDIT3-205ENST00000552740 951 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 AC139099.1-203ENST00000570366 607 ntTSL 3 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC8.9□□□□□ -0.98
LMO3Q8TAP4 AC135068.3-201ENST00000623441 1125 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 AL157359.3-201ENST00000623771 217 ntBASIC8.9□□□□□ -0.98
LMO3Q8TAP4 AC106733.1-201ENST00000624476 1038 ntBASIC8.9□□□□□ -0.98
LMO3Q8TAP4 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 TLK2P2-201ENST00000414066 2240 ntBASIC8.9□□□□□ -0.98
LMO3Q8TAP4 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC8.9□□□□□ -0.99
LMO3Q8TAP4 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.99
LMO3Q8TAP4 AL139811.2-201ENST00000373465 1630 ntBASIC8.9□□□□□ -0.99
LMO3Q8TAP4 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC8.9□□□□□ -0.99
LMO3Q8TAP4 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
LMO3Q8TAP4 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
LMO3Q8TAP4 IL18R1-201ENST00000233957 3661 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
LMO3Q8TAP4 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
LMO3Q8TAP4 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
LMO3Q8TAP4 PWAR5-201ENST00000624480 3180 ntBASIC8.89□□□□□ -0.99
LMO3Q8TAP4 DNAH10-209ENST00000614082 3484 ntTSL 5 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 CAP2-203ENST00000465994 1404 ntTSL 2 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 TGFB2-OT1-201ENST00000625474 1371 ntBASIC8.89□□□□□ -0.99
LMO3Q8TAP4 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 FAM205BP-202ENST00000399773 4009 ntBASIC8.89□□□□□ -0.99
LMO3Q8TAP4 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 ASAP1-IT2-201ENST00000626977 2031 ntBASIC8.89□□□□□ -0.99
LMO3Q8TAP4 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 MOSPD1-201ENST00000370777 784 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 MIR595-201ENST00000384905 96 ntBASIC8.89□□□□□ -0.99
LMO3Q8TAP4 UQCRHP2-201ENST00000415651 288 ntBASIC8.89□□□□□ -0.99
LMO3Q8TAP4 EIF4A1P10-201ENST00000428832 1216 ntBASIC8.89□□□□□ -0.99
LMO3Q8TAP4 RPS10P2-201ENST00000430953 494 ntBASIC8.89□□□□□ -0.99
LMO3Q8TAP4 AL359094.1-210ENST00000432554 730 ntTSL 3 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 RPS28P8-201ENST00000435020 208 ntBASIC8.89□□□□□ -0.99
LMO3Q8TAP4 RPS3AP29-201ENST00000437728 769 ntBASIC8.89□□□□□ -0.99
LMO3Q8TAP4 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 AC013399.1-201ENST00000450311 418 ntBASIC8.89□□□□□ -0.99
LMO3Q8TAP4 AC103563.4-201ENST00000454384 368 ntBASIC8.89□□□□□ -0.99
LMO3Q8TAP4 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 AC093297.2-202ENST00000514597 659 ntTSL 3 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 AC007570.1-201ENST00000539987 603 ntTSL 3 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 AC015802.4-201ENST00000589963 578 ntTSL 3 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 AC103691.1-201ENST00000619654 520 ntBASIC8.89□□□□□ -0.99
LMO3Q8TAP4 Metazoa_SRP.30-201ENST00000621054 280 ntBASIC8.89□□□□□ -0.99
LMO3Q8TAP4 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC8.89□□□□□ -0.99
LMO3Q8TAP4 SNHG5-218ENST00000623901 711 ntTSL 5 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 C1orf137-201ENST00000624685 386 ntTSL 3 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 AL121936.1-201ENST00000641660 2884 ntBASIC8.89□□□□□ -0.99
LMO3Q8TAP4 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 CEP128-209ENST00000555265 4662 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
LMO3Q8TAP4 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms