Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SLC1A1P43005 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC8.81□□□□□ -1
SLC1A1P43005 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
SLC1A1P43005 OR4C15-201ENST00000314644 1113 ntBASIC8.81□□□□□ -1
SLC1A1P43005 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC8.81□□□□□ -1
SLC1A1P43005 AL133343.1-201ENST00000375670 846 ntTSL 1 (best) BASIC8.81□□□□□ -1
SLC1A1P43005 FCAR-206ENST00000391724 762 ntTSL 1 (best) BASIC8.81□□□□□ -1
SLC1A1P43005 AC106017.1-202ENST00000424109 428 ntTSL 5 BASIC8.81□□□□□ -1
SLC1A1P43005 CHCHD4P2-201ENST00000431135 420 ntBASIC8.81□□□□□ -1
SLC1A1P43005 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC8.81□□□□□ -1
SLC1A1P43005 AC007952.3-202ENST00000435028 428 ntTSL 5 BASIC8.81□□□□□ -1
SLC1A1P43005 RPE-207ENST00000435437 858 ntTSL 2 BASIC8.81□□□□□ -1
SLC1A1P43005 AC243962.1-201ENST00000441512 579 ntBASIC8.81□□□□□ -1
SLC1A1P43005 AL096855.1-201ENST00000449895 516 ntTSL 3 BASIC8.81□□□□□ -1
SLC1A1P43005 AL392003.2-201ENST00000451015 679 ntBASIC8.81□□□□□ -1
SLC1A1P43005 SPATA24-203ENST00000451821 646 ntTSL 1 (best) BASIC8.81□□□□□ -1
SLC1A1P43005 RPSAP54-201ENST00000454001 886 ntBASIC8.81□□□□□ -1
SLC1A1P43005 AF241726.2-201ENST00000465127 954 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
SLC1A1P43005 AMD1P3-201ENST00000508874 994 ntBASIC8.81□□□□□ -1
SLC1A1P43005 SNCA-211ENST00000508895 905 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
SLC1A1P43005 TPRXL-211ENST00000532880 754 ntTSL 2 BASIC8.81□□□□□ -1
SLC1A1P43005 AMN1-207ENST00000536761 1025 ntTSL 2 BASIC8.81□□□□□ -1
SLC1A1P43005 AC073913.2-201ENST00000541512 145 ntBASIC8.81□□□□□ -1
SLC1A1P43005 AMN1-212ENST00000542781 879 ntTSL 1 (best) BASIC8.81□□□□□ -1
SLC1A1P43005 AC005632.1-201ENST00000550637 576 ntBASIC8.81□□□□□ -1
SLC1A1P43005 LINC00662-207ENST00000590677 883 ntTSL 5 BASIC8.81□□□□□ -1
SLC1A1P43005 LGALS17A-205ENST00000598736 1111 ntTSL 1 (best) BASIC8.81□□□□□ -1
SLC1A1P43005 RN7SKP290-201ENST00000606842 195 ntBASIC8.81□□□□□ -1
SLC1A1P43005 AC023983.2-201ENST00000608010 562 ntBASIC8.81□□□□□ -1
SLC1A1P43005 SNCA-212ENST00000611107 297 ntTSL 5 BASIC8.81□□□□□ -1
SLC1A1P43005 AC026336.5-201ENST00000624455 738 ntBASIC8.81□□□□□ -1
SLC1A1P43005 AL121594.6-201ENST00000633440 261 ntBASIC8.81□□□□□ -1
SLC1A1P43005 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SLC1A1P43005 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.81□□□□□ -1
SLC1A1P43005 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SLC1A1P43005 COPS5-201ENST00000357849 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SLC1A1P43005 NR1I3-205ENST00000367983 1473 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
SLC1A1P43005 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
SLC1A1P43005 DCAF4-212ENST00000553457 2896 ntTSL 1 (best) BASIC8.81□□□□□ -1
SLC1A1P43005 AL121936.1-201ENST00000641660 2884 ntBASIC8.81□□□□□ -1
SLC1A1P43005 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC8.81□□□□□ -1
SLC1A1P43005 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC8.81□□□□□ -1
SLC1A1P43005 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
SLC1A1P43005 ABCF2P1-201ENST00000465687 1867 ntBASIC8.81□□□□□ -1
SLC1A1P43005 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SLC1A1P43005 SSX2B-204ENST00000616191 1344 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
SLC1A1P43005 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
SLC1A1P43005 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SLC1A1P43005 FGF13-205ENST00000441825 1625 ntTSL 5 BASIC8.8□□□□□ -1
SLC1A1P43005 USP3-208ENST00000558285 1742 ntTSL 1 (best) BASIC8.8□□□□□ -1
SLC1A1P43005 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC8.8□□□□□ -1
SLC1A1P43005 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC8.8□□□□□ -1
SLC1A1P43005 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SLC1A1P43005 MIR4458HG-203ENST00000606459 3239 ntTSL 1 (best) BASIC8.8□□□□□ -1
SLC1A1P43005 EMC4-202ENST00000267750 1036 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SLC1A1P43005 RNASE3-201ENST00000304639 720 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SLC1A1P43005 MAGEC3-202ENST00000409007 1290 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
SLC1A1P43005 SLC8A1-AS1-203ENST00000418854 545 ntTSL 4 BASIC8.8□□□□□ -1
SLC1A1P43005 AL117378.1-202ENST00000421310 601 ntTSL 5 BASIC8.8□□□□□ -1
SLC1A1P43005 EIF4A1P10-201ENST00000428832 1216 ntBASIC8.8□□□□□ -1
SLC1A1P43005 AP000311.1-201ENST00000429238 1078 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
SLC1A1P43005 TISP43-205ENST00000440359 543 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
SLC1A1P43005 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
SLC1A1P43005 RPL21P92-201ENST00000454107 476 ntBASIC8.8□□□□□ -1
SLC1A1P43005 AL357874.2-201ENST00000457044 679 ntTSL 3 BASIC8.8□□□□□ -1
SLC1A1P43005 RN7SL449P-201ENST00000464937 286 ntBASIC8.8□□□□□ -1
SLC1A1P43005 AC087501.2-201ENST00000466869 581 ntBASIC8.8□□□□□ -1
SLC1A1P43005 AC096751.2-201ENST00000507483 792 ntTSL 3 BASIC8.8□□□□□ -1
SLC1A1P43005 RNA5SP159-201ENST00000517161 103 ntBASIC8.8□□□□□ -1
SLC1A1P43005 AC144568.2-201ENST00000522481 944 ntTSL 5 BASIC8.8□□□□□ -1
SLC1A1P43005 SLC5A4P1-201ENST00000532944 612 ntBASIC8.8□□□□□ -1
SLC1A1P43005 H2AFZP4-201ENST00000534148 377 ntBASIC8.8□□□□□ -1
SLC1A1P43005 AC018653.2-201ENST00000540190 238 ntBASIC8.8□□□□□ -1
SLC1A1P43005 AC007221.1-201ENST00000570038 796 ntTSL 5 BASIC8.8□□□□□ -1
SLC1A1P43005 CFAP52-208ENST00000576499 711 ntTSL 3 BASIC8.8□□□□□ -1
SLC1A1P43005 AC015908.3-201ENST00000579529 667 ntTSL 3 BASIC8.8□□□□□ -1
SLC1A1P43005 AC063950.1-202ENST00000600133 568 ntBASIC8.8□□□□□ -1
SLC1A1P43005 AL355989.2-201ENST00000603304 512 ntBASIC8.8□□□□□ -1
SLC1A1P43005 IGKV3OR2-5-201ENST00000605851 281 ntBASIC8.8□□□□□ -1
SLC1A1P43005 AC116003.3-201ENST00000612669 541 ntBASIC8.8□□□□□ -1
SLC1A1P43005 FRG1HP-203ENST00000615326 593 ntTSL 3 BASIC8.8□□□□□ -1
SLC1A1P43005 GZMB-209ENST00000616551 559 ntTSL 2 BASIC8.8□□□□□ -1
SLC1A1P43005 MIR7113-201ENST00000621222 59 ntBASIC8.8□□□□□ -1
SLC1A1P43005 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
SLC1A1P43005 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC8.8□□□□□ -1
SLC1A1P43005 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC8.8□□□□□ -1
SLC1A1P43005 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC8.8□□□□□ -1
SLC1A1P43005 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC8.8□□□□□ -1
SLC1A1P43005 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC8.8□□□□□ -1
SLC1A1P43005 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC8.8□□□□□ -1
SLC1A1P43005 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SLC1A1P43005 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
SLC1A1P43005 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC8.8□□□□□ -1
SLC1A1P43005 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
SLC1A1P43005 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC8.8□□□□□ -1
SLC1A1P43005 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SLC1A1P43005 LINC01748-205ENST00000635616 2143 ntTSL 5 BASIC8.8□□□□□ -1
SLC1A1P43005 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC8.8□□□□□ -1
SLC1A1P43005 TRIM48-201ENST00000417545 1445 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SLC1A1P43005 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms