Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AL354993.1-201ENST00000436286 3280 ntTSL 4 BASIC7.78□□□□□ -1.16
P04436 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 FCRL4-201ENST00000271532 3459 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 SNCA-201ENST00000336904 3041 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
P04436 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 NVL-202ENST00000340871 2431 ntTSL 2 BASIC7.78□□□□□ -1.16
P04436 MFAP3L-202ENST00000393702 1505 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
P04436 AC113189.6-201ENST00000636696 3591 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
P04436 FRMD6-201ENST00000344768 2972 ntTSL 2 BASIC7.77□□□□□ -1.16
P04436 TTC39A-212ENST00000447632 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
P04436 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.16
P04436 SIDT2-219ENST00000620360 3924 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
P04436 TTC6-203ENST00000476979 2253 ntTSL 2 BASIC7.77□□□□□ -1.17
P04436 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC7.77□□□□□ -1.17
P04436 AC104574.2-201ENST00000559783 1985 ntTSL 3 BASIC7.77□□□□□ -1.17
P04436 AP001527.1-201ENST00000566440 1957 ntBASIC7.77□□□□□ -1.17
P04436 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
P04436 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
P04436 AC025283.2-203ENST00000618352 2905 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
P04436 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
P04436 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
P04436 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
P04436 AL008729.1-203ENST00000606150 2305 ntTSL 2 BASIC7.77□□□□□ -1.17
P04436 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
P04436 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
P04436 MIR146B-201ENST00000365699 73 ntBASIC7.77□□□□□ -1.17
P04436 RNU1-8P-201ENST00000384328 165 ntBASIC7.77□□□□□ -1.17
P04436 AC009319.1-201ENST00000411493 754 ntBASIC7.77□□□□□ -1.17
P04436 MARK2P14-201ENST00000449657 628 ntBASIC7.77□□□□□ -1.17
P04436 DISC1-IT1-201ENST00000456782 762 ntTSL 3 BASIC7.77□□□□□ -1.17
P04436 RN7SL218P-201ENST00000464637 299 ntBASIC7.77□□□□□ -1.17
P04436 RN7SL135P-201ENST00000490144 278 ntBASIC7.77□□□□□ -1.17
P04436 AC095050.1-201ENST00000502661 905 ntTSL 5 BASIC7.77□□□□□ -1.17
P04436 GAPDHP44-201ENST00000513513 1007 ntBASIC7.77□□□□□ -1.17
P04436 SNRPCP8-201ENST00000514820 211 ntBASIC7.77□□□□□ -1.17
P04436 AP005597.3-201ENST00000532369 799 ntBASIC7.77□□□□□ -1.17
P04436 AC006206.2-201ENST00000537192 992 ntTSL 4 BASIC7.77□□□□□ -1.17
P04436 AC013452.2-201ENST00000557910 743 ntTSL 5 BASIC7.77□□□□□ -1.17
P04436 AC138907.5-201ENST00000561744 273 ntTSL 5 BASIC7.77□□□□□ -1.17
P04436 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC7.77□□□□□ -1.17
P04436 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC7.77□□□□□ -1.17
P04436 MIR4314-201ENST00000583321 92 ntBASIC7.77□□□□□ -1.17
P04436 AC005379.1-201ENST00000585647 328 ntTSL 2 BASIC7.77□□□□□ -1.17
P04436 AC114810.1-201ENST00000607415 473 ntBASIC7.77□□□□□ -1.17
P04436 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
P04436 RN7SL796P-201ENST00000613991 291 ntBASIC7.77□□□□□ -1.17
P04436 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
P04436 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC7.77□□□□□ -1.17
P04436 AP000720.2-201ENST00000623429 769 ntBASIC7.77□□□□□ -1.17
P04436 AL356095.2-201ENST00000624025 457 ntBASIC7.77□□□□□ -1.17
P04436 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC7.77□□□□□ -1.17
P04436 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC7.77□□□□□ -1.17
P04436 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
P04436 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
P04436 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC7.77□□□□□ -1.17
P04436 DCN-220ENST00000552962 1930 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
P04436 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
P04436 RUBCNL-202ENST00000378784 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
P04436 OTOA-201ENST00000286149 3471 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
P04436 AC091152.4-201ENST00000623480 3483 ntBASIC7.77□□□□□ -1.17
P04436 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
P04436 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
P04436 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
P04436 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
P04436 CHCHD7-207ENST00000518801 1670 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
P04436 TMEM97-202ENST00000336687 2115 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
P04436 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
P04436 CLIP1-214ENST00000540539 2592 ntTSL 2 BASIC7.76□□□□□ -1.17
P04436 LINC01304-204ENST00000454455 2454 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
P04436 AC092894.1-201ENST00000486726 1563 ntTSL 5 BASIC7.76□□□□□ -1.17
P04436 CD36-209ENST00000435819 2365 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
P04436 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
P04436 FSHR-201ENST00000304421 2176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
P04436 LINC02292-201ENST00000554522 1701 ntTSL 2 BASIC7.76□□□□□ -1.17
P04436 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
P04436 CD244-201ENST00000322302 921 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
P04436 HMGB1P39-201ENST00000366304 880 ntBASIC7.76□□□□□ -1.17
P04436 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
P04436 LINC02449-202ENST00000399866 517 ntTSL 3 BASIC7.76□□□□□ -1.17
P04436 AL032822.1-201ENST00000405827 1063 ntBASIC7.76□□□□□ -1.17
P04436 AKR1B1P8-201ENST00000418396 936 ntBASIC7.76□□□□□ -1.17
P04436 FAF2P1-201ENST00000429974 1298 ntBASIC7.76□□□□□ -1.17
P04436 AC104695.1-201ENST00000439700 849 ntTSL 3 BASIC7.76□□□□□ -1.17
P04436 AC012454.1-201ENST00000443948 995 ntBASIC7.76□□□□□ -1.17
P04436 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC7.76□□□□□ -1.17
P04436 GAPDHP28-201ENST00000455134 1003 ntBASIC7.76□□□□□ -1.17
P04436 GSTO3P-201ENST00000504733 718 ntBASIC7.76□□□□□ -1.17
P04436 AC114786.3-201ENST00000509304 705 ntBASIC7.76□□□□□ -1.17
P04436 PSAT1P1-201ENST00000518968 1106 ntBASIC7.76□□□□□ -1.17
P04436 IGLV7-35-201ENST00000523314 340 ntBASIC7.76□□□□□ -1.17
P04436 AC087521.3-202ENST00000526408 743 ntTSL 5 BASIC7.76□□□□□ -1.17
P04436 AP000873.3-201ENST00000531869 766 ntTSL 5 BASIC7.76□□□□□ -1.17
P04436 RBM4B-207ENST00000531969 769 ntTSL 3 BASIC7.76□□□□□ -1.17
P04436 AP000944.1-201ENST00000533886 564 ntTSL 4 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms