Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 ELK3-201ENST00000228741 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
UBE4BO95155 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
UBE4BO95155 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
UBE4BO95155 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
UBE4BO95155 CCDC134-202ENST00000402061 525 ntTSL 2 BASIC9.28□□□□□ -0.92
UBE4BO95155 AL807761.3-201ENST00000427833 329 ntTSL 3 BASIC9.28□□□□□ -0.92
UBE4BO95155 CDKN2B-AS1-203ENST00000428597 3835 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
UBE4BO95155 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC9.28□□□□□ -0.92
UBE4BO95155 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC9.28□□□□□ -0.92
UBE4BO95155 AF186996.1-201ENST00000466578 1015 ntBASIC9.28□□□□□ -0.92
UBE4BO95155 AC008514.1-201ENST00000521965 602 ntTSL 3 BASIC9.28□□□□□ -0.92
UBE4BO95155 ANKRD42-206ENST00000528722 954 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
UBE4BO95155 AC025165.2-201ENST00000549477 699 ntTSL 3 BASIC9.28□□□□□ -0.92
UBE4BO95155 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC9.28□□□□□ -0.92
UBE4BO95155 AL161725.1-211ENST00000592805 889 ntTSL 5 BASIC9.28□□□□□ -0.92
UBE4BO95155 INTS6-AS1-204ENST00000593709 648 ntTSL 5 BASIC9.28□□□□□ -0.92
UBE4BO95155 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC9.28□□□□□ -0.92
UBE4BO95155 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
UBE4BO95155 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC9.28□□□□□ -0.92
UBE4BO95155 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC9.28□□□□□ -0.92
UBE4BO95155 ABCB1-211ENST00000622132 4778 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
UBE4BO95155 AL049833.3-201ENST00000623920 3738 ntBASIC9.27□□□□□ -0.92
UBE4BO95155 SELENON-205ENST00000630065 2994 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
UBE4BO95155 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
UBE4BO95155 ZNF562-208ENST00000590155 1712 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.92
UBE4BO95155 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
UBE4BO95155 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
UBE4BO95155 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
UBE4BO95155 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.92
UBE4BO95155 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
UBE4BO95155 EXOC7P1-201ENST00000509881 2059 ntBASIC9.27□□□□□ -0.93
UBE4BO95155 LINC00284-202ENST00000439707 2521 ntTSL 5 BASIC9.27□□□□□ -0.93
UBE4BO95155 AC131935.2-201ENST00000623649 1371 ntBASIC9.27□□□□□ -0.93
UBE4BO95155 PSMC2-206ENST00000640277 1357 ntTSL 5 BASIC9.27□□□□□ -0.93
UBE4BO95155 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
UBE4BO95155 LINC01180-201ENST00000589259 2025 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
UBE4BO95155 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
UBE4BO95155 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
UBE4BO95155 NUTM1-203ENST00000537011 4102 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
UBE4BO95155 HHAT-203ENST00000367010 3626 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
UBE4BO95155 S100A8-202ENST00000368733 523 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
UBE4BO95155 FANCL-204ENST00000403676 849 ntTSL 3 BASIC9.27□□□□□ -0.93
UBE4BO95155 AL160153.1-201ENST00000415285 429 ntTSL 3 BASIC9.27□□□□□ -0.93
UBE4BO95155 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC9.27□□□□□ -0.93
UBE4BO95155 AC007036.1-201ENST00000430537 674 ntTSL 3 BASIC9.27□□□□□ -0.93
UBE4BO95155 KDM4A-AS1-203ENST00000434346 833 ntTSL 5 BASIC9.27□□□□□ -0.93
UBE4BO95155 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC9.27□□□□□ -0.93
UBE4BO95155 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC9.27□□□□□ -0.93
UBE4BO95155 DISC1-IT1-201ENST00000456782 762 ntTSL 3 BASIC9.27□□□□□ -0.93
UBE4BO95155 AC055758.2-202ENST00000482351 624 ntTSL 2 BASIC9.27□□□□□ -0.93
UBE4BO95155 AC103769.1-201ENST00000518507 283 ntTSL 3 BASIC9.27□□□□□ -0.93
UBE4BO95155 SAA3P-202ENST00000534768 642 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
UBE4BO95155 AL133304.3-201ENST00000550089 477 ntTSL 3 BASIC9.27□□□□□ -0.93
UBE4BO95155 AC140658.1-201ENST00000563019 346 ntTSL 5 BASIC9.27□□□□□ -0.93
UBE4BO95155 AL023284.4-201ENST00000564248 374 ntBASIC9.27□□□□□ -0.93
UBE4BO95155 AC104984.6-201ENST00000591928 360 ntTSL 3 BASIC9.27□□□□□ -0.93
UBE4BO95155 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC9.27□□□□□ -0.93
UBE4BO95155 AC079602.4-201ENST00000637836 532 ntBASIC9.27□□□□□ -0.93
UBE4BO95155 AC124944.3-204ENST00000641191 150 ntBASIC9.27□□□□□ -0.93
UBE4BO95155 PEX5L-209ENST00000468741 2309 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
UBE4BO95155 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
UBE4BO95155 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
UBE4BO95155 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
UBE4BO95155 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 CCT6P2-201ENST00000507234 1593 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 AC024896.1-201ENST00000500632 2549 ntTSL 5 BASIC9.26□□□□□ -0.93
UBE4BO95155 ARHGAP42P2-201ENST00000416089 2140 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 MAATS1-201ENST00000273390 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 SP140-204ENST00000417495 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 CALCOCO2-215ENST00000509507 1512 ntTSL 2 BASIC9.26□□□□□ -0.93
UBE4BO95155 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC9.26□□□□□ -0.93
UBE4BO95155 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC9.26□□□□□ -0.93
UBE4BO95155 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC9.26□□□□□ -0.93
UBE4BO95155 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC9.26□□□□□ -0.93
UBE4BO95155 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC9.26□□□□□ -0.93
UBE4BO95155 AC010200.1-201ENST00000547380 1454 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 MOSPD1-203ENST00000370783 2364 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 ENSA-209ENST00000369016 923 ntTSL 5 BASIC9.26□□□□□ -0.93
UBE4BO95155 CAPN3-208ENST00000397204 1237 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 ANXA2P3-201ENST00000404883 1008 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 AL032822.1-201ENST00000405827 1063 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 AL133216.1-201ENST00000428915 727 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 RPL12P14-201ENST00000431782 490 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 AL441963.1-201ENST00000435137 792 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 ALG13-204ENST00000436609 3812 ntTSL 5 BASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms