Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC010099.2-201ENST00000443177 373 ntBASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 AL138881.1-201ENST00000443445 789 ntTSL 3 BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 AL109945.1-201ENST00000448134 687 ntTSL 2 BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 RPL5P29-201ENST00000482972 894 ntBASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 RN7SL598P-201ENST00000494391 294 ntBASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 AC008632.1-201ENST00000519400 753 ntTSL 3 BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 AP002383.5-201ENST00000542623 1161 ntBASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 AC005833.4-201ENST00000542988 449 ntTSL 3 BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 AL023284.4-201ENST00000564248 374 ntBASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 LINC02152-201ENST00000566208 1281 ntBASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 AC007221.1-201ENST00000570038 796 ntTSL 5 BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 SRP68P1-201ENST00000584247 269 ntBASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 TBX18-AS1-208ENST00000591225 762 ntTSL 5 BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 MIR6127-201ENST00000614019 109 ntBASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 AC103691.1-201ENST00000619654 520 ntBASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 AC002401.3-201ENST00000620020 440 ntBASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 MTMR2-204ENST00000409459 3420 ntTSL 5 BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 PFKM-203ENST00000359794 3228 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 EFTUD2-201ENST00000402521 3045 ntTSL 2 BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 MED23-202ENST00000368053 2811 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 PDE1A-203ENST00000409365 2034 ntTSL 5 BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 CSF2RA-206ENST00000381529 1816 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 XRCC6P1-201ENST00000420392 1805 ntBASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 CSF2RA-202ENST00000355805 1410 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 LINC01260-201ENST00000415889 1416 ntTSL 5 BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 MAATS1-201ENST00000273390 4433 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPIPA3F8WFD2 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC7.84□□□□□ -1.16
NPIPA3F8WFD2 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
NPIPA3F8WFD2 CDHR3-211ENST00000478080 2633 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 AP002765.1-201ENST00000528675 1507 ntBASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 JAZF1-AS1-202ENST00000444500 3684 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 ABL2-206ENST00000504405 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 FASTKD2-202ENST00000402774 2586 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 USP17L15-202ENST00000621432 1680 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 CCR6-203ENST00000400926 3216 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 STEAP3-AS1-201ENST00000454260 3218 ntTSL 2 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 ARMCX5-GPRASP2-206ENST00000476910 1848 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 USP2-AS1-201ENST00000498979 2486 ntTSL 3 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 KRTAP13-4-201ENST00000334068 797 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 OR2T4-202ENST00000366475 1047 ntBASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 TRBV5-1-201ENST00000390381 652 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 AL137784.1-201ENST00000407121 745 ntBASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 VN2R10P-201ENST00000411871 853 ntBASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 AL441943.3-201ENST00000418524 587 ntTSL 5 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 ATP5G1P5-201ENST00000429024 411 ntBASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 FAF2P1-201ENST00000429974 1298 ntBASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 LYZL4-202ENST00000441172 838 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 AL590609.1-201ENST00000442164 328 ntBASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 PRELID1P3-201ENST00000450055 643 ntBASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 AC020718.1-201ENST00000456031 556 ntTSL 4 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 BUB3P1-201ENST00000458451 999 ntBASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 RPL34P29-201ENST00000491411 325 ntBASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 GSTO3P-201ENST00000504733 718 ntBASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 Z99943.2-201ENST00000507585 266 ntBASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 GNGT2-203ENST00000507680 585 ntAPPRIS P1 TSL 4 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 AC098864.1-202ENST00000507869 2129 ntTSL 2 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 GNGT2-206ENST00000515635 783 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 SDR16C6P-202ENST00000524136 955 ntBASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 OR5G1P-201ENST00000525221 946 ntBASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 NTAN1P3-201ENST00000535885 715 ntBASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 HNRNPCP3-201ENST00000560385 875 ntBASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 AC138907.5-201ENST00000561744 273 ntTSL 5 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 AL121928.1-201ENST00000608017 521 ntBASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 AC116050.1-201ENST00000609777 1194 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPIPA3F8WFD2 LINC01176-202ENST00000628121 716 ntTSL 3 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms