Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC9.1□□□□□ -0.95
MTHFRP42898 AC092958.1-202ENST00000485006 424 ntTSL 3 BASIC9.1□□□□□ -0.95
MTHFRP42898 JRKL-AS1-201ENST00000511243 426 ntTSL 2 BASIC9.1□□□□□ -0.95
MTHFRP42898 RN7SKP190-201ENST00000516079 286 ntBASIC9.1□□□□□ -0.95
MTHFRP42898 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 OR10Y1P-201ENST00000528485 974 ntBASIC9.1□□□□□ -0.95
MTHFRP42898 TPRXL-211ENST00000532880 754 ntTSL 2 BASIC9.1□□□□□ -0.95
MTHFRP42898 OR4A19P-201ENST00000533579 1103 ntBASIC9.1□□□□□ -0.95
MTHFRP42898 AL137230.2-201ENST00000555070 452 ntTSL 3 BASIC9.1□□□□□ -0.95
MTHFRP42898 AC093334.1-201ENST00000559904 423 ntTSL 3 BASIC9.1□□□□□ -0.95
MTHFRP42898 C20orf78-202ENST00000623418 606 ntTSL 2 BASIC9.1□□□□□ -0.95
MTHFRP42898 AP000356.4-201ENST00000639500 172 ntBASIC9.1□□□□□ -0.95
MTHFRP42898 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC9.1□□□□□ -0.95
MTHFRP42898 ABCA9-207ENST00000495634 1428 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 COMMD3-BMI1-205ENST00000602390 1419 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
MTHFRP42898 GOSR2-215ENST00000638374 2683 ntTSL 5 BASIC9.1□□□□□ -0.95
MTHFRP42898 VSIG4-204ENST00000455586 2190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC9.1□□□□□ -0.95
MTHFRP42898 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC9.1□□□□□ -0.95
MTHFRP42898 SPATA31D5P-201ENST00000376459 4784 ntBASIC9.1□□□□□ -0.95
MTHFRP42898 SLC8A1-202ENST00000402441 3065 ntTSL 2 BASIC9.1□□□□□ -0.95
MTHFRP42898 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 ZNF833P-202ENST00000635221 1540 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 CHODL-206ENST00000400135 2136 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 KCNJ15-208ENST00000398938 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
MTHFRP42898 AC025580.2-204ENST00000560077 2399 ntTSL 5 BASIC9.09□□□□□ -0.95
MTHFRP42898 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
MTHFRP42898 FBXW11P1-201ENST00000393804 1474 ntBASIC9.09□□□□□ -0.95
MTHFRP42898 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
MTHFRP42898 KCTD16-202ENST00000512467 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
MTHFRP42898 TRIM49D1-202ENST00000530311 2164 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
MTHFRP42898 CREM-207ENST00000356917 1895 ntTSL 2 BASIC9.09□□□□□ -0.95
MTHFRP42898 PFKM-210ENST00000547587 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
MTHFRP42898 ZNF714-201ENST00000425625 2562 ntTSL 5 BASIC9.09□□□□□ -0.95
MTHFRP42898 FLI1-202ENST00000344954 3427 ntTSL 2 BASIC9.09□□□□□ -0.95
MTHFRP42898 ARNT-208ENST00000505755 2427 ntTSL 2 BASIC9.09□□□□□ -0.95
MTHFRP42898 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
MTHFRP42898 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
MTHFRP42898 MRPL47-202ENST00000392659 673 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
MTHFRP42898 AC003075.1-208ENST00000415246 596 ntTSL 3 BASIC9.09□□□□□ -0.95
MTHFRP42898 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC9.09□□□□□ -0.95
MTHFRP42898 RANP5-201ENST00000427731 655 ntBASIC9.09□□□□□ -0.95
MTHFRP42898 OSBPL10-AS1-204ENST00000436598 513 ntTSL 3 BASIC9.09□□□□□ -0.95
MTHFRP42898 OR7E109P-201ENST00000445529 855 ntBASIC9.09□□□□□ -0.95
MTHFRP42898 OR4A47-201ENST00000446524 1064 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
MTHFRP42898 AC003075.1-206ENST00000448664 541 ntTSL 3 BASIC9.09□□□□□ -0.95
MTHFRP42898 RN7SL854P-201ENST00000459767 295 ntBASIC9.09□□□□□ -0.95
MTHFRP42898 RPL5P17-201ENST00000469685 877 ntBASIC9.09□□□□□ -0.95
MTHFRP42898 LINC01411-202ENST00000506862 744 ntTSL 3 BASIC9.09□□□□□ -0.95
MTHFRP42898 AC096751.2-201ENST00000507483 792 ntTSL 3 BASIC9.09□□□□□ -0.95
MTHFRP42898 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC9.09□□□□□ -0.95
MTHFRP42898 LINC00678-201ENST00000527083 786 ntTSL 3 BASIC9.09□□□□□ -0.95
MTHFRP42898 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC9.09□□□□□ -0.95
MTHFRP42898 AC048382.1-201ENST00000542197 1018 ntTSL 5 BASIC9.09□□□□□ -0.95
MTHFRP42898 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC9.09□□□□□ -0.95
MTHFRP42898 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC9.09□□□□□ -0.95
MTHFRP42898 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC9.09□□□□□ -0.95
MTHFRP42898 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC9.09□□□□□ -0.95
MTHFRP42898 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC9.09□□□□□ -0.95
MTHFRP42898 LINC01572-202ENST00000563770 568 ntTSL 5 BASIC9.09□□□□□ -0.95
MTHFRP42898 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC9.09□□□□□ -0.95
MTHFRP42898 MIR4262-201ENST00000578394 54 ntBASIC9.09□□□□□ -0.95
MTHFRP42898 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC9.09□□□□□ -0.95
MTHFRP42898 AL592504.1-201ENST00000605319 439 ntBASIC9.09□□□□□ -0.95
MTHFRP42898 AC023983.2-201ENST00000608010 562 ntBASIC9.09□□□□□ -0.95
MTHFRP42898 Metazoa_SRP.71-201ENST00000612122 282 ntBASIC9.09□□□□□ -0.95
MTHFRP42898 AC079416.2-201ENST00000625035 1193 ntBASIC9.09□□□□□ -0.95
MTHFRP42898 AL121594.6-201ENST00000633440 261 ntBASIC9.09□□□□□ -0.95
MTHFRP42898 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
MTHFRP42898 CASK-208ENST00000442742 2800 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
MTHFRP42898 LIG4-202ENST00000405925 4065 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
MTHFRP42898 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
MTHFRP42898 ZNF343-201ENST00000278772 3632 ntAPPRIS P3 TSL 2 BASIC9.09□□□□□ -0.95
MTHFRP42898 LINC01761-201ENST00000424943 2755 ntTSL 2 BASIC9.09□□□□□ -0.95
MTHFRP42898 DCX-201ENST00000356220 3019 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
MTHFRP42898 AC106800.1-201ENST00000501221 1362 ntBASIC9.09□□□□□ -0.95
MTHFRP42898 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
MTHFRP42898 TNPO3-205ENST00000627585 4514 ntTSL 2 BASIC9.09□□□□□ -0.95
MTHFRP42898 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
MTHFRP42898 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC9.09□□□□□ -0.95
MTHFRP42898 DIAPH3-202ENST00000377908 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
MTHFRP42898 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
MTHFRP42898 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
MTHFRP42898 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
MTHFRP42898 AC009948.1-205ENST00000453026 2007 ntTSL 3 BASIC9.09□□□□□ -0.95
MTHFRP42898 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
MTHFRP42898 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC9.08□□□□□ -0.96
MTHFRP42898 IL2RB-201ENST00000216223 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
MTHFRP42898 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
MTHFRP42898 ZNF780A-202ENST00000414720 2396 ntTSL 2 BASIC9.08□□□□□ -0.96
MTHFRP42898 OVCH1-201ENST00000318184 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
MTHFRP42898 GLT8D2-202ENST00000546436 1578 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
MTHFRP42898 PNMA8C-201ENST00000617053 4255 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
MTHFRP42898 AL031118.1-201ENST00000607727 2955 ntBASIC9.08□□□□□ -0.96
MTHFRP42898 CAPN3-206ENST00000397163 3228 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
MTHFRP42898 EPS15L1-212ENST00000597937 3486 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
MTHFRP42898 WNT2B-201ENST00000256640 2819 ntTSL 2 BASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms