Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC005614.2-201ENST00000595508 461 ntTSL 5 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 LINC00969-233ENST00000597871 839 ntTSL 5 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 CD209-211ENST00000602261 939 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 AC026150.3-201ENST00000602595 499 ntBASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 AC009686.2-201ENST00000607017 577 ntBASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 LINC02018-202ENST00000608707 445 ntTSL 3 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 ADAL-208ENST00000610420 974 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 AC025031.3-201ENST00000611566 368 ntBASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 AC026468.1-201ENST00000614981 107 ntBASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 AC027139.2-201ENST00000615639 448 ntBASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 TMEM182-211ENST00000640575 1155 ntTSL 5 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 ALDH7A1-227ENST00000636879 2501 ntTSL 5 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 PREPL-208ENST00000410081 3080 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 AL008729.1-203ENST00000606150 2305 ntTSL 2 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 CCL22-201ENST00000219235 2929 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 NIM1K-204ENST00000512796 2929 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 OTOA-201ENST00000286149 3471 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 CNTNAP4-202ENST00000377504 4723 ntTSL 5 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 CEACAM20-202ENST00000614577 1530 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 UAP1-202ENST00000367924 2066 ntAPPRIS ALT1 TSL 5 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 C1GALT1C1-202ENST00000371313 1492 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 MCM10-206ENST00000484800 3157 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 ANKRD6-218ENST00000522441 3157 ntAPPRIS ALT1 TSL 2 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 CCR9-203ENST00000395963 2512 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 ZNF665-201ENST00000396424 4159 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 ZNF726-206ENST00000594466 2473 ntTSL 5 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 MAPK10-205ENST00000395160 2448 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 NBPF26-207ENST00000619748 2933 ntTSL 5 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 FYTTD1-203ENST00000415708 1342 ntTSL 2 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 LINC00927-203ENST00000558913 2878 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 SERPINB8-202ENST00000353706 3387 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 DEFB104A-201ENST00000314265 281 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 DEFB104B-201ENST00000316169 281 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 CLEC2A-201ENST00000339766 732 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 ATP5J2-202ENST00000359832 323 ntTSL 2 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 PPIH-203ENST00000372550 665 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 AC234778.1-201ENST00000399253 370 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 OR2L6P-201ENST00000416377 940 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 AL121990.1-201ENST00000417605 591 ntTSL 3 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 FKBP1AP3-201ENST00000423650 319 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 IGKV1D-35-201ENST00000442736 271 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 LINC01647-201ENST00000453135 1285 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 LINC00445-202ENST00000456848 643 ntTSL 3 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 PSMD6-AS1-201ENST00000462717 441 ntTSL 3 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 ARHGAP31-AS1-201ENST00000466292 624 ntTSL 4 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 RN7SL223P-201ENST00000470401 294 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 RN7SL107P-201ENST00000478127 283 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 RN7SL130P-201ENST00000489463 305 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 RNA5SP460-201ENST00000516789 100 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 AC078886.1-201ENST00000549144 554 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 AC087477.5-201ENST00000558246 562 ntTSL 3 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 LSM3P5-201ENST00000566307 306 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 AC005552.1-201ENST00000577556 662 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 RN7SL49P-201ENST00000581392 298 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 PDLIM1P3-201ENST00000582370 599 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 LGALS17A-205ENST00000598736 1111 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 AL021808.1-201ENST00000604325 1117 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 LINC00837-203ENST00000608061 555 ntTSL 4 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 UBTFL11-201ENST00000428234 2252 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 MTRR-201ENST00000264668 3274 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 LINC02292-201ENST00000554522 1701 ntTSL 2 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 TCF4-207ENST00000540999 2572 ntTSL 2 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 NOL4-201ENST00000261592 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 AL022323.2-201ENST00000623239 3000 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 MAP3K7CL-202ENST00000339024 2066 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 MAP3K7CL-208ENST00000399935 2093 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 PARP11-204ENST00000447133 4377 ntTSL 2 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 OSBPL3-203ENST00000396431 2969 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 AP001527.1-201ENST00000566440 1957 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 ADD2-204ENST00000407644 3741 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 ATP5A1P3-201ENST00000573189 1507 ntBASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 ZNF833P-202ENST00000635221 1540 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 MINDY3-201ENST00000277632 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 SCIMP-203ENST00000574081 2383 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPIPA3F8WFD2 CEACAM8-201ENST00000244336 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 NBPF19-202ENST00000426482 2344 ntTSL 5 BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms