Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.411e-8■■□□□ 13.7
PRPF8Q6P2Q9 DEF8-213ENST00000563848 649 ntTSL 313.08□□□□□ -0.323e-6■■□□□ 13.7
PRPF8Q6P2Q9 USP48-212ENST00000527823 554 ntTSL 47.41□□□□□ -1.227e-10■■□□□ 13.7
PRPF8Q6P2Q9 SCLY-213ENST00000450965 1918 ntTSL 1 (best)12.76□□□□□ -0.371e-6■■□□□ 13.7
PRPF8Q6P2Q9 ELP1-202ENST00000467959 437 ntTSL 37.64□□□□□ -1.198e-9■■□□□ 13.7
PRPF8Q6P2Q9 TESC-207ENST00000549210 422 ntTSL 215.88■□□□□ 0.133e-7■■□□□ 13.7
PRPF8Q6P2Q9 ABHD12-204ENST00000461204 712 ntTSL 319.5■□□□□ 0.712e-7■■□□□ 13.7
PRPF8Q6P2Q9 FAM20A-204ENST00000590873 804 ntTSL 37.89□□□□□ -1.158e-9■■□□□ 13.7
PRPF8Q6P2Q9 AEN-203ENST00000557927 5039 ntTSL 1 (best)10.04□□□□□ -0.84e-9■■□□□ 13.7
PRPF8Q6P2Q9 MAP4-214ENST00000482752 386 ntTSL 31.06□□□□□ -2.249e-7■■□□□ 13.7
PRPF8Q6P2Q9 AP2M1-219ENST00000484469 558 ntTSL 315.48■□□□□ 0.072e-6■■□□□ 13.7
PRPF8Q6P2Q9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.043e-6■■□□□ 13.7
PRPF8Q6P2Q9 ZNF710-202ENST00000558883 1191 ntTSL 313.17□□□□□ -0.33e-6■■□□□ 13.7
PRPF8Q6P2Q9 ZNF710-203ENST00000559360 513 ntTSL 312.51□□□□□ -0.413e-6■■□□□ 13.7
PRPF8Q6P2Q9 ENO3-214ENST00000522425 662 ntTSL 210.16□□□□□ -0.783e-6■■□□□ 13.7
PRPF8Q6P2Q9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.336e-8■■□□□ 13.7
PRPF8Q6P2Q9 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.396e-8■■□□□ 13.7
PRPF8Q6P2Q9 SLC39A14-203ENST00000359741 4641 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.736e-8■■□□□ 13.7
PRPF8Q6P2Q9 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.96e-8■■□□□ 13.7
PRPF8Q6P2Q9 AC074143.1-201ENST00000580114 1287 ntAPPRIS P5 TSL 521.4■■□□□ 1.021e-8■■□□□ 13.7
PRPF8Q6P2Q9 HSF4-214ENST00000521314 1555 ntTSL 519.11■□□□□ 0.651e-8■■□□□ 13.7
PRPF8Q6P2Q9 HSF4-222ENST00000522870 1599 ntTSL 519.02■□□□□ 0.641e-8■■□□□ 13.7
PRPF8Q6P2Q9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.96■□□□□ 0.631e-8■■□□□ 13.7
PRPF8Q6P2Q9 HSF4-203ENST00000517685 1249 ntTSL 518.24■□□□□ 0.511e-8■■□□□ 13.7
PRPF8Q6P2Q9 HSF4-224ENST00000523562 1839 ntTSL 218.23■□□□□ 0.511e-8■■□□□ 13.7
PRPF8Q6P2Q9 HSF4-220ENST00000522295 1539 ntTSL 518.08■□□□□ 0.491e-8■■□□□ 13.7
PRPF8Q6P2Q9 HSF4-201ENST00000434833 1568 ntTSL 1 (best)17.81■□□□□ 0.441e-8■■□□□ 13.7
PRPF8Q6P2Q9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.391e-8■■□□□ 13.7
PRPF8Q6P2Q9 HSF4-216ENST00000521624 1358 ntTSL 1 (best)16.98■□□□□ 0.311e-8■■□□□ 13.7
PRPF8Q6P2Q9 HSF4-218ENST00000522023 636 ntTSL 416.06■□□□□ 0.161e-8■■□□□ 13.7
PRPF8Q6P2Q9 HSF4-223ENST00000523077 828 ntTSL 216.03■□□□□ 0.161e-8■■□□□ 13.7
PRPF8Q6P2Q9 FOXRED1-206ENST00000526525 586 ntTSL 414.74□□□□□ -0.059e-14■■□□□ 13.7
PRPF8Q6P2Q9 AC074143.1-202ENST00000518753 501 ntAPPRIS ALT2 TSL 512.94□□□□□ -0.341e-8■■□□□ 13.7
PRPF8Q6P2Q9 DMKN-234ENST00000471017 410 ntTSL 27.75□□□□□ -1.178e-7■■□□□ 13.7
PRPF8Q6P2Q9 N4BP2L2-215ENST00000512755 1273 ntTSL 20.58□□□□□ -2.321e-6■■□□□ 13.7
PRPF8Q6P2Q9 TAF6L-206ENST00000531265 325 ntTSL 312.67□□□□□ -0.385e-6■■□□□ 13.7
PRPF8Q6P2Q9 ARHGEF25-203ENST00000466399 593 ntTSL 211.83□□□□□ -0.515e-6■■□□□ 13.7
PRPF8Q6P2Q9 ARHGEF25-205ENST00000471370 1945 ntTSL 511.48□□□□□ -0.575e-6■■□□□ 13.7
PRPF8Q6P2Q9 POMT1-212ENST00000462375 1001 ntTSL 511.2□□□□□ -0.625e-6■■□□□ 13.7
PRPF8Q6P2Q9 ARHGAP21-207ENST00000446003 3859 ntTSL 1 (best)9.95□□□□□ -0.825e-6■■□□□ 13.7
PRPF8Q6P2Q9 ARHGEF25-204ENST00000469072 668 ntTSL 38.49□□□□□ -1.055e-6■■□□□ 13.7
PRPF8Q6P2Q9 RCBTB1-204ENST00000490058 373 ntTSL 25.89□□□□□ -1.475e-6■■□□□ 13.7
PRPF8Q6P2Q9 ARHGEF25-207ENST00000484357 274 ntTSL 34.77□□□□□ -1.655e-6■■□□□ 13.7
PRPF8Q6P2Q9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.131e-8■■□□□ 13.7
PRPF8Q6P2Q9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.211e-8■■□□□ 13.7
PRPF8Q6P2Q9 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.361e-8■■□□□ 13.7
PRPF8Q6P2Q9 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.411e-8■■□□□ 13.7
PRPF8Q6P2Q9 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC10.48□□□□□ -0.731e-8■■□□□ 13.7
PRPF8Q6P2Q9 ANPEP-202ENST00000558177 918 ntTSL 37.19□□□□□ -1.265e-8■■□□□ 13.7
PRPF8Q6P2Q9 ANPEP-204ENST00000559761 469 ntTSL 26.93□□□□□ -1.35e-8■■□□□ 13.7
PRPF8Q6P2Q9 ASGR2-206ENST00000576487 1055 ntTSL 1 (best)13.14□□□□□ -0.311e-10■■□□□ 13.7
PRPF8Q6P2Q9 ASGR2-204ENST00000450034 932 ntTSL 211.85□□□□□ -0.511e-10■■□□□ 13.7
PRPF8Q6P2Q9 TPRA1-206ENST00000465915 569 ntTSL 316.82■□□□□ 0.282e-15■■□□□ 13.7
PRPF8Q6P2Q9 COPS7B-215ENST00000450501 559 ntTSL 415.84■□□□□ 0.134e-6■■□□□ 13.7
PRPF8Q6P2Q9 COPS7B-211ENST00000432387 584 ntTSL 415.79■□□□□ 0.124e-6■■□□□ 13.7
PRPF8Q6P2Q9 COPS7B-202ENST00000357490 563 ntTSL 413.52□□□□□ -0.244e-6■■□□□ 13.7
PRPF8Q6P2Q9 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC10.09□□□□□ -0.795e-7■■□□□ 13.7
PRPF8Q6P2Q9 UBE4B-210ENST00000488228 560 ntTSL 39.36□□□□□ -0.912e-7■■□□□ 13.7
PRPF8Q6P2Q9 QKI-208ENST00000537041 583 ntTSL 58.62□□□□□ -1.036e-8■■□□□ 13.7
PRPF8Q6P2Q9 RHPN2-202ENST00000544458 3793 ntTSL 27.05□□□□□ -1.283e-7■■□□□ 13.7
PRPF8Q6P2Q9 COPS7B-218ENST00000466901 598 ntTSL 36.65□□□□□ -1.354e-6■■□□□ 13.7
PRPF8Q6P2Q9 QKI-215ENST00000544823 597 ntTSL 21.54□□□□□ -2.166e-8■■□□□ 13.7
PRPF8Q6P2Q9 BTBD2-202ENST00000587225 1070 ntTSL 214.94□□□□□ -0.021e-6■■□□□ 13.7
PRPF8Q6P2Q9 GPX2-205ENST00000612794 1084 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.014e-7■■□□□ 13.7
PRPF8Q6P2Q9 GPX2-202ENST00000553522 1134 ntTSL 1 (best)8.63□□□□□ -1.034e-7■■□□□ 13.7
PRPF8Q6P2Q9 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.344e-7■■□□□ 13.7
PRPF8Q6P2Q9 GPX2-204ENST00000557323 778 ntTSL 36.04□□□□□ -1.444e-7■■□□□ 13.7
PRPF8Q6P2Q9 GPX2-203ENST00000557049 476 ntTSL 35.41□□□□□ -1.544e-7■■□□□ 13.7
PRPF8Q6P2Q9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.092e-9■■□□□ 13.7
PRPF8Q6P2Q9 IQSEC1-205ENST00000618604 3744 ntTSL 1 (best) BASIC9.33□□□□□ -0.922e-9■■□□□ 13.7
PRPF8Q6P2Q9 FNTA-202ENST00000524546 750 ntTSL 319.74■□□□□ 0.751e-11■■□□□ 13.7
PRPF8Q6P2Q9 FNTA-206ENST00000527153 582 ntTSL 317.6■□□□□ 0.411e-11■■□□□ 13.7
PRPF8Q6P2Q9 FNTA-209ENST00000531266 590 ntTSL 59.77□□□□□ -0.851e-11■■□□□ 13.7
PRPF8Q6P2Q9 FNTA-213ENST00000533559 429 ntTSL 35.96□□□□□ -1.461e-11■■□□□ 13.7
PRPF8Q6P2Q9 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.781e-11■■□□□ 13.7
PRPF8Q6P2Q9 MICALL2-209ENST00000479007 1855 ntTSL 215.33■□□□□ 0.058e-10■■□□□ 13.7
PRPF8Q6P2Q9 MICALL2-215ENST00000496184 2722 ntTSL 213.66□□□□□ -0.221e-9■■□□□ 13.7
PRPF8Q6P2Q9 MICALL2-207ENST00000471899 899 ntTSL 213.48□□□□□ -0.251e-9■■□□□ 13.7
PRPF8Q6P2Q9 THOC6-208ENST00000574957 1143 ntTSL 1 (best)18.55■□□□□ 0.563e-8■■□□□ 13.7
PRPF8Q6P2Q9 THOC6-206ENST00000574498 788 ntTSL 315.51■□□□□ 0.073e-8■■□□□ 13.7
PRPF8Q6P2Q9 THOC6-204ENST00000571057 988 ntTSL 1 (best)14.72□□□□□ -0.053e-8■■□□□ 13.7
PRPF8Q6P2Q9 THOC6-203ENST00000571046 614 ntTSL 213.61□□□□□ -0.233e-8■■□□□ 13.7
PRPF8Q6P2Q9 IARS-207ENST00000467876 298 ntTSL 31□□□□□ -2.259e-13■■□□□ 13.7
PRPF8Q6P2Q9 PIEZO1-203ENST00000419505 1635 ntTSL 1 (best)16.62■□□□□ 0.258e-10■■□□□ 13.7
PRPF8Q6P2Q9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.353e-14■■□□□ 13.7
PRPF8Q6P2Q9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.253e-14■■□□□ 13.7
PRPF8Q6P2Q9 RBP4-203ENST00000371469 814 ntTSL 5 BASIC11.22□□□□□ -0.613e-14■■□□□ 13.7
PRPF8Q6P2Q9 RBP4-204ENST00000629763 838 ntTSL 5 BASIC9.39□□□□□ -0.913e-14■■□□□ 13.7
PRPF8Q6P2Q9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.74e-7■■□□□ 13.7
PRPF8Q6P2Q9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.394e-7■■□□□ 13.7
PRPF8Q6P2Q9 DHFR-205ENST00000511032 1474 ntTSL 2 BASIC8.48□□□□□ -1.054e-7■■□□□ 13.7
PRPF8Q6P2Q9 DHFR-202ENST00000504396 1447 ntTSL 2 BASIC7.93□□□□□ -1.144e-7■■□□□ 13.7
PRPF8Q6P2Q9 DHFR-206ENST00000513048 994 ntTSL 1 (best)7.57□□□□□ -1.24e-7■■□□□ 13.7
PRPF8Q6P2Q9 GTF3C2-204ENST00000423998 828 ntTSL 511.47□□□□□ -0.572e-17■■□□□ 13.7
PRPF8Q6P2Q9 GTF3C2-208ENST00000457748 557 ntTSL 510.21□□□□□ -0.782e-17■■□□□ 13.7
PRPF8Q6P2Q9 ERBB2-214ENST00000583038 4930 ntTSL 213.35□□□□□ -0.275e-7■■□□□ 13.7
PRPF8Q6P2Q9 SQSTM1-212ENST00000508284 578 ntTSL 415.37■□□□□ 0.054e-19■■□□□ 13.7
PRPF8Q6P2Q9 INTS11-241ENST00000531292 704 ntTSL 29.43□□□□□ -0.91e-6■■□□□ 13.7
PRPF8Q6P2Q9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.31□□□□□ -0.125e-7■■□□□ 13.7
PRPF8Q6P2Q9 ZSWIM8-205ENST00000433366 5773 ntTSL 513.25□□□□□ -0.295e-7■■□□□ 13.7
Retrieved 100 of 73,762 protein–RNA pairs in 1923.1 ms