Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 AC091874.3-201ENST00000512672 1195 ntBASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 AC100791.3-201ENST00000617619 330 ntBASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 MYC-209ENST00000641252 345 ntBASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 CYP21A1P-202ENST00000354927 1481 ntBASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 AC006128.1-201ENST00000624704 1661 ntBASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 MCRIP2P1-201ENST00000394346 511 ntBASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB9Q9Y5E1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 AC027702.1-201ENST00000563810 1770 ntBASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 AL355472.2-201ENST00000422958 438 ntBASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB9Q9Y5E1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.64■□□□□ 0.9
PCDHB9Q9Y5E1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.64■□□□□ 0.9
PCDHB9Q9Y5E1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB9Q9Y5E1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB9Q9Y5E1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB9Q9Y5E1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB9Q9Y5E1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB9Q9Y5E1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB9Q9Y5E1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB9Q9Y5E1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB9Q9Y5E1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHB9Q9Y5E1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHB9Q9Y5E1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PCDHB9Q9Y5E1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB9Q9Y5E1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHB9Q9Y5E1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHB9Q9Y5E1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 AC026366.1-201ENST00000488803 879 ntBASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.63■□□□□ 0.89
PCDHB9Q9Y5E1 CYP2T3P-201ENST00000601990 817 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms